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As of 18-Sep-2019 number of released structures: 10387
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NDB ID: PD0269  PDB ID: 1KB4 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12CC_DA402DC403:DG434DT435_DD0.473-0.293.3344.9943.46732.509-1.110.0363.326.127-8.82533.058
14CC_DA404DG405:DC432DT433_DD0.533-0.8013.093-2.732.41634.794-1.671-1.272.9844.0264.54934.978
19CC_DA409DC410:DG427DT428_DD0.351-0.6613.5251.595-0.51235.665-0.999-0.3243.545-0.836-2.60335.703
112CC_DA412DA413:DT424DT425_DD-1.015-0.2323.441-6.273-0.69137.987-0.2590.7013.561-1.0539.55638.489
113CC_DA413DG414:DC423DT424_DD0.324-0.5783.2530.945.74433.993-1.851-0.4033.1249.737-1.59434.473
11CC_DC401DA402:DT435DG436_DD-0.1660.0033.467-1.6048.05534.903-1.2240.0243.38913.2042.62935.827
13CC_DC403DA404:DT433DG434_DD-0.7720.2943.528-8.3323.62537.592-0.0510.0283.6235.52612.70338.636
18CC_DC408DA409:DT428DG429_DD-0.5021.4563.137-4.8672.95836.8581.8910.1493.2774.6457.64137.28
110CC_DC410DG411:DC426DG427_DD0.1790.3043.5186.1995.87339.428-0.2810.5013.5148.583-9.05940.306
117CC_DC417DA418:DT419DG420_DD-0.6791.3823.268-4.4180.5833.3912.2890.4413.3511.0047.64733.678
15CC_DG405DG406:DC431DC432_DD-0.757-0.9673.7234.6692.74236.273-1.9561.9163.5224.374-7.44936.662
16CC_DG406DT407:DA430DC431_DD-0.53-0.7113.156-4.6341.32427.578-1.7750.0273.1632.7519.62827.988
111CC_DG411DA412:DT425DC426_DD-0.0250.4493.195-3.246.7929.105-0.519-0.6133.19913.2356.31430.041
114CC_DG414DG415:DC422DC423_DD-0.656-0.9713.5070.1861.28635.772-1.7781.0963.4672.093-0.30235.795
115CC_DG415DT416:DA421DC422_DD-0.461-0.3643.263-0.4031.10929.161-0.9630.8283.2532.2010.79929.184
17CC_DT407DC408:DG429DA430_DD0.9341.4953.3396.6840.95837.2042.179-0.5363.4851.487-10.37237.791
116CC_DT416DC417:DG420DA421_DD1.2591.6583.1497.4092.37641.3482.062-0.983.4013.329-10.38242.042

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.