A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 23-Sep-2020 number of released structures: 10967
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NDB ID: PD0247  PDB ID: 1MJP 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12CC_DA3DG4:DC7DT8_DD-0.48-0.6983.2744.464.43826.658-2.5442.0893.0029.457-9.50527.377
14CC_DA5DC6:DG5DT6_DD-0.3-0.823.529-2.1251.18840.763-1.3150.1783.5151.7043.04840.832
15CC_DC6DG7:DC4DG5_DD-0.017-0.0153.2020.643-2.7824.3020.8110.2353.182-6.575-1.5224.467
18CC_DC9DT10:DA1DG2_DD-0.017-1.1373.374-3.6473.0722.537-3.936-1.253.1567.7449.19923.03
13CC_DG4DA5:DT6DC7_DD-1.001-0.8283.186-9.4069.74732.462-2.8080.2732.9916.56415.98635.104
16CC_DG7DT8:DA3DC4_DD0.019-0.7923.6161.1588.15130.832-3.0380.1933.30314.998-2.13231.886
11CC_DT2DA3:DT8DA9_DD0.1620.5433.161-7.9974.95641.820.262-0.9983.1216.83911.03542.819
17CC_DT8DC9:DG2DA3_DD0.364-0.13.0983.501-1.12842.825-0.031-0.1663.118-1.541-4.78442.976

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.