A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 1MT4  PDB ID: 1MT4 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16A_A6:U19_A-0.244-0.0630.5547.798-16.572-1.445
17A_A7:U18_A-0.055-0.06-0.483-3.186-31.599-0.404
13A_C3:G22_A0.813-0.280.3931.195-22.349-3.171
18A_C8:G17_A0.082-0.028-0.4711.57-24.0262.166
11A_G1:C24_A-0.883-0.2810.248-7.199-21.714-3.089
12A_G2:C23_A-0.69-0.2030.421-2.91-19.918-3.667
14A_G4:C21_A-0.898-0.3350.5210.321-25.808-2.715
19A_G9:A16_A6.716-4.104-0.4520.891-10.552-4.837
15A_U5:A20_A0.212-0.0770.4830.523-23.301-4.596
110A_U10:A15_A1.936-3.647-2.49-17.7299.732-50.365

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.