A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 25-May-2022 number of released structures: 12098
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NDB ID: DR0008  PDB ID: 1MWL 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
17A_A9:U36_B0.288-0.1890.0213.565-16.5622.617
12A_C3:G43_B0.124-0.0680.074-2.7470.773-0.881
15A_C6:G40_B0.385-0.301-0.338-3.3322.95-0.978
16A_C8:G37_B0.081-0.165-0.0083.783-15.2951.685
18A_C10:G35_B0.2470.0040.0585.345-19.4145.128
19A_C11:G34_B-0.163-0.236-0.1757.074-9.5010.804
116A_C20:G26_B-0.032-0.353-0.016-1.02-2.545-1.323
118A_C22:G24_B0.337-0.261-0.3064.554-4.818-4.449
11A_G2:C44_B-0.751-0.49-0.085-6.243-5.306-8.348
13A_G4:C42_B-0.148-0.281-0.052-0.922-3.2592.994
110A_G12:C33_B-0.228-0.039-0.303-5.922-13.556-0.838
111A_G13:C32_B-0.087-0.1560.162-3.024-12.4941.084
113A_G15:C30_B0.102-0.0870.101-3.558-8.2331.528
114A_G18:C28_B-0.005-0.075-0.2884.374-3.0113.452
117A_G21:C25_B-0.146-0.3560.076-0.48-0.853-4.989
14A_U5:U41_B-2.319-1.497-0.5333.097-11.765-7.448
112A_U14:A31_B0.171-0.1030.222-10.168-16.577-0.145
115A_U19:U27_B2.283-1.738-0.262-1.109-9.677-10.42

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.