A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 29-Jun-2022 number of released structures: 12153
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NDB ID: PD0358  PDB ID: 1N48 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16B_DA1806:DT1913_C-0.185-0.1370.072-0.788-7.6853.552
17B_DA1807:DT1912_C0.133-0.1560.0748.95-8.1861.639
110B_DA1810:DT1909_C0.324-0.108-0.203-10.065-9.410.747
111B_DC1811:DG1908_C0.289-0.1160.354-11.923-5.6950.852
11B_DG1801:DC1918_C0.099-0.151-0.0351.183-7.603-3.579
12B_DG1802:DC1917_C-0.1610.10.21113.756-2.6192.542
13B_DG1803:DC1916_C-0.129-0.1230.2074.86-7.47-1.68
14B_DG1804:DC1915_C-0.33-0.2830.4366.572-0.416-7.827
15B_DG1805:DC1914_C-0.087-0.286-0.0070.97-6.094-5.438
18B_DG1808:DC1911_C0.116-0.0970.1667.909-7.0141.809
19B_DG1809:DC1910_C-0.231-0.328-0.13-7.535-10.801-0.07
112B_DT1812:DA1907_C-0.188-0.0020.112-8.92-5.194-3.309

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.