A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: 1NC0  PDB ID: 1NC0 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_C5:G20_A-0.619-0.113-0.0853.922-4.978-3.258
16A_C6:G19_A0.667-0.336-0.0270.831-0.29-1.355
17A_C7:G17_A-0.653-0.0460.009-2.095-2.945-8.109
18A_C8:G16_A0.877-0.238-0.0882.303-2.252.621
11A_G1:C24_A-0.924-0.184-0.204-4.19-3.1453.686
12A_G2:C23_A0.484-0.223-0.061-2.224-7.699-2.034
19A_G10:A14_A6.607-3.5530.3988.7644.0711.645
13A_U3:A22_A0.694-0.295-0.068-0.897-4.257-2.051
14A_U4:A21_A-0.0130.042-0.0950.982-2.305-1.72

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.