1NC0: Base Pair Morphology Step Parameters

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As of 17-Aug-2022 number of released structures: 12237

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NDB ID: 1NC0 PDB ID: 1NC0

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	AA_C5C6:G19G20_AA	1.612	-0.591	4.482	2.234	-24.053	32.856	3.067	-1.96	4.082	-36.953	-3.433	40.582
1	6	AA_C6C7:G17G19_AA	1.408	-1.158	5.295	-10.608	-7.184	41.358	-0.446	-3.575	4.932	-9.89	14.603	43.214
1	7	AA_C7C8:G16G17_AA	1.1	-1.042	3.923	0.097	-12.933	39.097	0.275	-1.554	4.057	-18.712	-0.141	41.101
1	1	AA_G1G2:C23C24_AA	-1.386	-0.554	3.336	-2.369	8.603	44.696	-1.485	1.579	3.247	11.181	3.079	45.533
1	2	AA_G2U3:A22C23_AA	0.477	-0.617	3.869	0.69	1.229	35.218	-1.235	-0.667	3.855	2.031	-1.14	35.245
1	3	AA_U3U4:A21A22_AA	-0.621	-0.728	3.892	0.589	3.835	23.756	-3.188	1.709	3.713	9.238	-1.417	24.067
1	4	AA_U4C5:G20A21_AA	0.317	-0.931	3.539	-0.253	11.95	31.211	-3.67	-0.596	2.988	21.259	0.45	33.368

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.