A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 27-Oct-2021 number of released structures: 11731
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NDB ID: PD0379  PDB ID: 1NK6 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13B_DA24:DT9_C-0.101-0.1720.116-1.18-17.1221.671
16B_DA27:DT6_C0.227-0.0840.086.744-10.4179.644
12B_DC23:DG10_C0.0280.2010.353-6.461-6.6960.446
18B_DC29:DG4_C0.382-0.206-0.67323.263-4.306-2.49
11B_DG22:DC11_C-0.774-0.4060.315-5.802-10.82-3.788
15B_DG26:DC7_C-0.163-0.069-0.0367.11910.661-0.386
14B_DT25:DA8_C0.1130.018-0.246-7.239-8.0653.734
17B_DT28:DA5_C-0.038-0.096-0.13420.216-9.25610.22

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.