A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: UR0030  PDB ID: 1NUV 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A21:U47_B0.366-0.186-0.0332.268-19.191-1.097
16A_A25:A25_G-1.509-1.209-0.0067.519-15.108179.988
113A_A29:U41_B0.072-0.0820.194-1.246-16.3012.956
14A_C22:G46_B0.475-0.0970.21-6.118-22.7373.893
15A_C23:A45_B4.794-0.6270.556-21.388-11.0185.56
111A_C27:G43_B0.359-0.1860.169-0.321-14.633-0.623
112A_C28:G42_B0.189-0.1290.366-6.666-10.871-0.374
11A_G19:C49_B-0.155-0.1420.059-1.736-14.8870.97
12A_G20:C48_B-0.363-0.1390.061.311-13.9330.047
17A_G24:G24_G1.3011.4940.023-13.28718.027-179.281
114A_G30:C40_B-0.301-0.1990.002-3.408-17.575-1.901
117C_A21:U47_D0.092-0.1010.023-1.268-17.7270.077
19C_A25:A25_E-6.1465.0760.0514.3519.407-179.313
122C_A29:U41_D0.006-0.1450.1885.594-13.9296.261
118C_C22:G46_D0.43-0.1840.081-5.856-24.7960.951
119C_C23:A45_D3.836-0.3760.564-22.998-16.5050.067
120C_C27:G43_D0.134-0.093-0.1343.223-6.2711.854
121C_C28:G42_D0.212-0.1510.0011.786-7.9692.981
115C_G19:C49_D-0.1650.011-0.175-11.237-8.4071.856
116C_G20:C48_D-0.212-0.137-0.123-3.873-8.811-0.975
18C_G24:G24_E-3.111-8.255-0.009-25.246-4.72-179.627
110C_G26:G26_E-1.081-1.457-0.02911.228-16.469179.438
123C_G30:C40_D-0.403-0.240.1384.739-13.0151.393
126E_A21:U47_F0.151-0.1050.019-0.476-18.6930.226
131E_A29:U41_F-0.105-0.0910.1853.718-14.147.217
127E_C22:G46_F0.411-0.1980.122-6.891-23.4220.917
128E_C23:A45_F4.11-0.3920.563-23.674-14.8160.324
129E_C27:G43_F0.194-0.0770.039-0.347-4.4162.475
130E_C28:G42_F0.205-0.123-0.0942.959-11.1523.327
124E_G19:C49_F-0.153-0.004-0.223-11.551-8.4042.639
125E_G20:C48_F-0.309-0.139-0.162-3.427-8.394-0.854
132E_G30:C40_F-0.446-0.1860.2034.309-11.3631.244
135G_A21:U47_H0.278-0.137-0.0464.179-19.215-0.333
140G_A29:U41_H0.081-0.1090.178-1.037-16.5282.548
136G_C22:G46_H0.269-0.0080.237-7.224-21.8683.479
137G_C23:A45_H4.726-0.6060.686-20.754-11.1035.795
138G_C27:G43_H0.299-0.1780.248-1.691-14.106-1.197
139G_C28:G42_H0.292-0.0760.241-3.374-13.110.319
133G_G19:C49_H-0.21-0.0610.063-3.064-14.3152.677
134G_G20:C48_H-0.387-0.1010.1541.844-12.2640.059
141G_G30:C40_H-0.257-0.177-0.005-3.045-15.393-2.186

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.