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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0096  PDB ID: 1O0C 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16B_A907:U966_B0.157-0.2780.4788.695-1.44-5.635
117B_A913:A922_B6.345-3.9880.0991.873-9.418-11.055
118B_A914:U908_B-3.975-1.8330.8613.2348.919-97.259
125B_A931:U939_B-0.107-0.209-0.406-13.568-8.0910.955
19B_A951:U963_B-0.13-0.3910.0840.805-6.2158.175
115B_C911:G924_B-0.258-0.301-0.026-2.716-1.491-0.408
116B_C912:G923_B0.332-0.137-0.349-1.978-5.005-2.003
121B_C927:G943_B-0.004-0.3240.19111.647-17.8193.157
122B_C928:G942_B-0.21-0.334-0.22610.939-11.7213.383
17B_C949:G965_B0.514-0.338-0.1758.45-12.165-0.135
11B_G902:C971_B-0.586-0.296-0.041-8.6081.836-7.297
12B_G903:C970_B0.011-0.2920.076-0.366-7.3280.349
13B_G904:C969_B-0.1-0.2670.291-6.306-13.96-0.803
14B_G905:C968_B-0.488-0.203-0.329-14.407-15.7880.644
114B_G910:C925_B-0.194-0.356-0.25-3.935-6.084-1.864
119B_G915:C948_B0.3224.3090.078.34614.636167.186
120B_G919:C956_B-0.407-0.258-0.29919.887-19.365-3.026
123B_G929:C941_B0.042-0.35-0.253-0.282-7.5553.118
124B_G930:C940_B-1.922-0.124-0.045-1.841-14.47815.203
18B_G950:C964_B-0.214-0.256-0.056-5.497-13.1862.229
110B_G952:C962_B-0.179-0.245-0.394-1.943-11.0511.81
111B_G953:C961_B-0.055-0.0650.175-9.955-5.88.016
15B_U906:A967_B0.047-0.1310.081-13.793-7.5541.368
126B_U932:U938_B3.208-1.299-0.423-4.005-6.237-32.49
127B_U933:A937_B6.498-4.677-0.58810.10117.067-33.494
112B_U954:A958_B4.421-2.5610.82310.3148.24-80.804
113B_U955:G918_B0.433-6.2580.19529.8348.495-89.297

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.