A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 28-Sep-2022 number of released structures: 12311
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NDB ID: NA0259  PDB ID: 1OE4 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16EE_DA287DG288:DC297DT298_FF-1.3630.2053.163-6.43710.42532.461-1.2891.283.27717.87311.03734.638
11EE_DC281DC282:DG303DG304_FF-0.503-0.3253.1433.9923.7933.624-1.1261.4613.0126.497-6.84434.059
12EE_DC282DC283:DG302DG303_FF0.9280.2033.4580.2130.92838.1970.186-1.3893.4671.418-0.32638.208
13EE_DC283DG284:DC301DG302_FF0.2470.8823.195-0.8991.61535.6611.21-0.5313.2242.6351.46635.707
19EE_DC290DC291:DG294DG295_FF0.808-0.113.0612.9163.80930.609-0.901-0.9823.0877.16-5.48130.974
14EE_DG284DT285:DA300DC301_FF0.139-0.2753.384-1.5174.4426.244-1.789-0.7083.289.6793.30826.653
17EE_DG288DT289:DA296DC297_FF-0.12-0.4333.2920.6463.74930.01-1.5880.3613.2137.203-1.2430.244
15EE_DT285DA287:DT298DA300_FF0.4360.2997.19811.2799.63377.132-0.3580.3527.197.659-8.96878.326
18EE_DT289DC290:DG295DA296_FF0.255-0.0823.3561.1534.77734.683-0.873-0.2463.3227.963-1.92135.019

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.