A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Aug-2019 number of released structures: 10343
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NDB ID: NA0256  PDB ID: 1OE6 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16E_DA287:DT298_F-0.065-0.0130.1240.805-2.338.075
11E_DC281:DG304_F-0.004-0.130.436-14.801-13.307-5.974
12E_DC282:DG303_F0.76-0.139-0.191-2.777-16.995-3.366
13E_DC283:DG302_F0.2750.0090.427-10.612-3.8280.125
19E_DC290:DG295_F0.199-0.54-0.2816.803-12.049-6.792
110E_DC291:DG294_F0.053-0.352-0.07113.572-6.745-3.217
14E_DG284:DC301_F0.168-0.4660.3474.517-4.066-4.621
17E_DG288:DC297_F-0.482-0.3320.0683.806-2.078-4.924
15E_DT285:DA300_F-0.807-0.1890.2972.478-1.688-12.259
18E_DT289:DA296_F0.135-0.361-0.2811.348-8.415-5.555

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.