1OE6: Base Pair Morphology Step Parameters

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As of 21-Aug-2019 number of released structures: 10343

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NDB ID: NA0256 PDB ID: 1OE6

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	6	EE_DA287DG288:DC297DT298_FF	-1.976	0.037	3.138	-6.285	7.225	25.734	-1.765	2.564	3.402	15.552	13.529	27.43
1	1	EE_DC281DC282:DG303DG304_FF	-0.104	-0.139	3.13	7.533	-2.985	39.175	0.125	0.979	3.061	-4.395	-11.091	39.972
1	2	EE_DC282DC283:DG302DG303_FF	0.977	0.364	3.532	-2.101	8.089	33.437	-0.751	-2.005	3.458	13.793	3.583	34.437
1	3	EE_DC283DG284:DC301DG302_FF	-0.075	0.526	3.159	0.171	-0.591	34.971	0.961	0.15	3.15	-0.984	-0.284	34.976
1	9	EE_DC290DC291:DG294DG295_FF	0.835	-0.04	3.268	-0.663	5.515	30.897	-1.106	-1.668	3.195	10.247	1.232	31.38
1	4	EE_DG284DT285:DA300DC301_FF	-0.189	-0.339	3.46	0.7	3.804	19.919	-2.767	0.867	3.328	10.866	-1.998	20.287
1	7	EE_DG288DT289:DA296DC297_FF	-0.151	-0.38	3.39	4.047	1.904	31.375	-1.057	1.045	3.317	3.499	-7.436	31.685
1	5	EE_DT285DA287:DT298DA300_FF	0.791	-0.025	6.982	6.726	11.045	89.809	-0.49	-0.269	6.982	7.79	-4.744	90.538
1	8	EE_DT289DC290:DG295DA296_FF	0.338	0.17	3.24	2.878	5.828	32.022	-0.708	-0.103	3.237	10.43	-5.151	32.658

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.