A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1OLN  PDB ID: 1OLN 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
113C_A1057:U1081_C0.092-0.0280.123-1.018-19.1318.423
112C_A1086:U1082_C0.2321.405-0.28318.891-6.288168.228
12C_C1052:G1107_C0.367-0.2890.141-3.133-17.3115.15
119C_C1064:G1074_C0.34-0.331-0.118-4.999-14.6374.496
110C_C1092:G1099_C-0.037-0.275-0.2430.5730.1813.261
11C_G1051:C1108_C-0.4530.102-0.068-6.725-8.8196.827
14C_G1054:C1105_C-0.457-0.0570.085-2.78-8.4635.038
15C_G1055:C1104_C0.126-0.229-0.448-13.474-14.4872.434
16C_G1056:A1103_C6.768-4.215-0.139-17.709-10.873-5.174
115C_G1059:C1079_C-0.131-0.2570.144-7.401-4.623-4.126
117C_G1062:C1076_C-0.273-0.151-0.2141.559-5.131-3.633
118C_G1063:C1075_C-0.297-0.38-0.472-8.395-16.5620.132
17C_G1087:C1102_C-0.2650.011-0.387-11.911-0.9414.348
19C_G1091:C1100_C-0.212-0.084-0.356-2.7870.737.17
111C_G1093:A1098_C6.806-4.083-0.058-6.4760.815-5.736
13C_U1053:A1106_C-0.887-0.0180.105-6.222-13.3749.602
114C_U1058:A1080_C-0.197-0.1080.082-15.671-7.5426.802
116C_U1060:A1088_C-0.633.3980.653-2.6295.058-67.855
120C_U1065:A1073_C5.606-1.138-0.137-9.754-5.6366.689
18C_U1090:U1101_C-2.485-1.7630.037-6.809-5.98220.218

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.