1OLN: Base Pair Morphology Step Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082

Search for released structures

NDB ID: 1OLN PDB ID: 1OLN

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	12	CC_A1057U1058:A1080U1081_CC	-0.644	-2.099	3.531	-2.744	7.17	34.429	-4.556	0.646	3.086	11.93	4.566	35.249
1	11	CC_A1086A1057:U1081U1082_CC	-2.601	-2.575	0.742	78.607	-150.786	113.056	-1.029	1.438	1.215	-76.122	-39.684	174.515
1	2	CC_C1052U1053:A1106G1107_CC	0.385	-1.138	3.139	-0.239	12.505	27.48	-4.454	-0.784	2.401	24.763	0.472	30.143
1	17	CC_C1064U1065:A1073G1074_CC	0.331	-1.004	3.425	6.517	6.551	50.927	-1.61	0.077	3.297	7.547	-7.508	51.703
1	10	CC_C1092G1093:A1098G1099_CC	-0.235	-1.285	3.512	2.276	5.012	59.455	-1.556	0.356	3.393	5.042	-2.29	59.686
1	1	CC_G1051C1052:G1107C1108_CC	-0.428	-1.249	3.065	-2.682	7.815	36.267	-2.901	0.348	2.77	12.357	4.242	37.165
1	4	CC_G1054G1055:C1104C1105_CC	0.195	-1.744	3.587	1.714	11.219	32.62	-4.708	-0.059	2.856	19.262	-2.943	34.487
1	5	CC_G1055G1056:A1103C1104_CC	-0.498	-0.666	3.644	3.331	10.803	66.035	-1.07	0.595	3.486	9.838	-3.034	66.888
1	6	CC_G1056G1087:C1102A1103_CC	-3.406	0.612	3.246	8.328	3.35	37.659	0.557	6.056	2.508	5.102	-12.681	38.676
1	14	CC_G1059U1060:A1088C1079_CC	2.88	-0.799	-1.653	-26.651	-168.644	-173.467	0.353	1.448	-1.67	84.329	-13.327	-179.473
1	15	CC_G1062G1063:C1075C1076_CC	-0.429	-1.765	3.516	-1.132	7.856	35.996	-3.883	0.522	3.088	12.526	1.804	36.833
1	16	CC_G1063C1064:G1074C1075_CC	0.878	-1.623	3.189	0.8	2.312	35.389	-2.99	-1.328	3.099	3.798	-1.315	35.47
1	7	CC_G1087U1090:U1101C1102_CC	-0.921	-3.414	3.388	2.664	-3.26	37.233	-4.858	1.808	3.591	-5.086	-4.156	37.462
1	9	CC_G1091C1092:G1099C1100_CC	-0.024	-2.312	3.184	0.134	2.438	29.161	-5.076	0.075	2.984	4.831	-0.266	29.26
1	3	CC_U1053G1054:C1105A1106_CC	0.051	-1.23	3.216	-1.519	5.078	32.776	-2.967	-0.333	2.992	8.926	2.67	33.191
1	13	CC_U1058G1059:C1079A1080_CC	-1.017	-1.756	3.114	3.393	6.573	28.474	-4.695	2.642	2.518	13.085	-6.755	29.4
1	8	CC_U1090G1091:C1100U1101_CC	-0.808	-1.471	3.182	1.729	4.771	35.646	-3.017	1.539	2.926	7.745	-2.807	35.994

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.