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As of 1-Dec-2021 number of released structures: 11785
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NDB ID: PD0404  PDB ID: 1OUQ 


Base Pair Hydrogen Bonding Classification

CSV Format

Model NumberPair NumberPair NameLeontis / Westhof ClassificationSaenger Classification
12C_DA102:DT135_D120
14C_DA104:DT133_D120
15C_DA105:DT132_D00
112C_DA112:DT125_D120
114C_DA114:DT123_D120
16C_DC106:DG131_D119
19C_DC109:DG128_D119
11C_DG101:DC136_D119
110C_DG110:DC127_D119
13C_DT103:DA134_D120
18C_DT108:DA129_D120
111C_DT111:DA126_D120
113C_DT113:DA124_D120
17C_UMP107:DA130_D120
118X_DA119:DT118_D00
123X_DA124:DT113_D120
125X_DA126:DT111_D120
128X_DA129:DT108_D120
129X_DA130:DT107_D120
133X_DA134:DT103_D120
121X_DC122:DG115_D119
126X_DC127:DG110_D119
135X_DC136:DG101_D119
116X_DG117:DC120_D119
120X_DG121:DC116_D119
127X_DG128:DC109_D10
130X_DG131:DC106_D10
115X_DT116:DA121_D120
117X_DT118:DA119_D10
119X_DT120:DA117_D00
122X_DT123:DA114_D120
124X_DT125:DA112_D120
131X_DT132:DA105_D120
132X_DT133:DA104_D120
134X_DT135:DA102_D00
150G_A3P115:DT122_H120
137G_DA102:DT135_H00
139G_DA104:DT133_H120
140G_DA105:DT132_H120
147G_DA112:DT125_H120
149G_DA114:DT123_H120
141G_DC106:DG131_H119
144G_DC109:DG128_H119
136G_DG101:DC136_H119
145G_DG110:DC127_H119
138G_DT103:DA134_H120
143G_DT108:DA129_H00
146G_DT111:DA126_H120
148G_DT113:DA124_H120
142G_UMP107:DA130_H00
154Y_DA119:DT118_H120
159Y_DA124:DT113_H120
161Y_DA126:DT111_H120
164Y_DA129:DT108_H120
165Y_DA130:DT107_H120
169Y_DA134:DT103_H120
157Y_DC122:DG115_H119
162Y_DC127:DG110_H119
171Y_DC136:DG101_H10
152Y_DG117:DC120_H10
156Y_DG121:DC116_H119
163Y_DG128:DC109_H119
166Y_DG131:DC106_H10
151Y_DT116:DA121_H120
153Y_DT118:DA119_H120
155Y_DT120:DA117_H120
158Y_DT123:DA114_H120
160Y_DT125:DA112_H120
167Y_DT132:DA105_H10
168Y_DT133:DA104_H120
170Y_DT135:DA102_H120

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)