A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1QES  PDB ID: 1QES 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U14_B0.066-0.07-0.0194.6973.923-3.7
17A_C7:G10_B0.147-0.0480.066-0.4056.194-1.409
18A_C8:G9_B-0.298-0.089-0.59813.068-1.286-2.789
11A_G1:C16_B0.382-0.079-0.536-13.267-7.275-0.869
12A_G2:C15_B0.0090.00.037-2.9645.05-0.554
14A_G4:U13_B-2.349-0.320.149-0.035-6.5667.473
15A_U5:G12_B2.545-0.3580.133-3.536-6.1226.523
16A_U6:A11_B0.007-0.1040.011-5.9141.578-1.119

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.