A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 1QFQ  PDB ID: 1QFQ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_C2:G14_A0.164-0.095-0.0010.0040.023-1.159
13A_C3:G13_A0.132-0.091-0.0050.035-0.016-1.488
14A_C4:G12_A0.098-0.11-0.004-0.088-0.046-1.264
11A_G1:C15_A0.071-0.103-0.006-0.0230.085-3.149
16A_G6:A10_A6.017-6.2581.46124.31930.864-24.152
15A_U5:A11_A0.136-0.134-0.0170.287-0.0421.751

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.