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As of 22-Jun-2022 number of released structures: 12128
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NDB ID: PD0155  PDB ID: 1QN5 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
14C_DA204:DT225_D-0.159-0.068-0.024-38.8113.8846.165
16C_DA206:DT223_D0.107-0.136-0.284-3.734-2.0254.783
17C_DA207:DT222_D0.116-0.146-0.09512.79-2.2615.529
19C_DA209:DT220_D0.0760.0590.40342.492-4.1967.842
114C_DA214:DT215_D0.805-0.1140.24423.777-15.8864.685
12C_DC202:DG227_D0.493-0.3920.565-14.996-11.203-5.077
113C_DC213:DG216_D0.74-0.435-0.1527.694-0.223-4.093
11C_DG201:DC228_D-0.58-0.406-0.028-3.276-5.235-3.482
18C_DG208:DC221_D-0.313-0.0020.43832.9492.2052.945
110C_DG210:DC219_D0.782-3.579-0.5555.0017.84572.562
111C_DG211:DC218_D-0.209-0.257-0.188-5.842-8.773-2.519
112C_DG212:DC217_D-0.572-0.308-0.186-8.356-3.358-2.838
13C_DT203:DA226_D0.099-0.24-0.085-2.256-1.1837.845
15C_DT205:DA224_D0.006-0.1440.064-27.181-8.0573.573
118E_DA204:DT225_F-0.154-0.0380.036-35.99715.216.568
120E_DA206:DT223_F0.05-0.173-0.443-4.545-0.6424.61
121E_DA207:DT222_F0.032-0.172-0.1414.253-0.935.73
123E_DA209:DT220_F0.0610.0510.33839.266-4.9128.335
128E_DA214:DT215_F0.699-0.0990.29118.621-6.8841.199
116E_DC202:DG227_F0.237-0.3160.553-16.573-9.17-4.946
127E_DC213:DG216_F0.646-0.406-0.2717.0383.917-3.903
115E_DG201:DC228_F-0.177-0.3680.017-17.078-12.22-9.805
122E_DG208:DC221_F-0.2180.0190.60135.0482.8160.493
124E_DG210:DC219_F0.702-3.502-0.4513.6719.00273.343
125E_DG211:DC218_F-0.28-0.260.1324.709-11.051-1.435
126E_DG212:DC217_F-0.123-0.262-0.043-6.047-6.934-3.773
117E_DT203:DA226_F-0.104-0.2680.128-11.833-3.6747.141
119E_DT205:DA224_F-0.066-0.070.027-26.048-6.9024.901

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.