A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 22-Jun-2022 number of released structures: 12128
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NDB ID: PD0058  PDB ID: 1QP4 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11MM_DA700DC701:DG714DT715_MM0.421-0.7713.191-3.9821.80825.363-2.216-2.0153.0294.0798.98325.731
15MM_DA704DA705:DT710DT711_MM-0.4670.333.241-2.0960.42332.7850.5120.4693.2670.7493.70832.853
16MM_DA705DT706:DA709DT710_MM0.286-0.9523.183-3.5557.51431.918-2.877-1.0722.84413.3836.33232.955
110MM_DA709DT710:DA705DT706_MM-0.286-0.9523.1833.5557.51431.917-2.8771.0722.84413.383-6.33232.955
12MM_DC701DG702:DC713DG714_MM-0.905-0.8753.332-1.438-2.99731.819-1.0261.3723.435-5.4482.61331.988
14MM_DC703DA704:DT711DG712_MM1.1661.1773.5593.3435.18438.9241.056-1.2843.7637.72-4.97939.391
18MM_DC707DG708:DC707DG708_MM0.01.2885.1290.045.02514.306-5.5930.02.82173.2770.047.13
114MM_DC713DG714:DC701DG702_MM0.905-0.8753.3321.438-2.99731.819-1.026-1.3723.435-5.448-2.61331.988
13MM_DG702DC703:DG712DC713_MM-0.587-0.0643.3951.349-2.62238.2060.2421.0693.37-3.999-2.05738.315
19MM_DG708DA709:DT706DC707_MM0.7030.2333.729-2.815-0.39231.8940.503-1.853.652-0.7115.1132.017
113MM_DG712DC713:DG702DC703_MM0.587-0.0643.395-1.349-2.62238.2060.242-1.0693.37-3.9992.05738.315
115MM_DG714DT715:DA700DC701_MM-0.421-0.7713.1913.9821.80825.363-2.2162.0153.0294.079-8.98325.731
17MM_DT706DC707:DG708DA709_MM-0.7030.2333.7292.815-0.39231.8940.5031.853.652-0.711-5.1132.017
111MM_DT710DT711:DA704DA705_MM0.4670.333.2412.0960.42332.7850.512-0.4693.2670.749-3.70832.853
112MM_DT711DG712:DC703DA704_MM-1.1661.1773.559-3.3435.18438.9241.0561.2843.7637.724.97939.391

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.