A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1R7W  PDB ID: 1R7W 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U32_A-0.0490.021-0.212-5.271-4.6768.534
16A_A6:U29_A-0.438-0.0680.0578.8755.1943.762
19A_A15:U26_A0.402-0.085-0.884-18.372-12.423-1.08
17A_C7:G28_A0.06-0.0760.2836.491-8.113-0.461
18A_C14:G27_A-0.266-0.032-0.166-5.039-6.381-3.568
110A_C16:G25_A0.539-0.443-1.1626.846-19.969.001
11A_G1:C34_A-0.745-0.1560.023-5.821-5.034-1.254
12A_G2:C33_A0.456-0.036-0.265-4.052-2.189-6.563
14A_G4:C31_A0.120.065-0.528-11.303-2.6863.559
15A_G5:C30_A-0.328-0.046-0.374-4.7331.805-5.847
111A_G17:C24_A0.229-0.0590.0513.593-12.178-0.191
112A_G18:C23_A-0.193-0.074-0.452-3.772-5.687-4.145
113A_G19:A22_A7.699-4.7421.07322.597-0.89-45.187

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.