A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: PDE016  PDB ID: 1RVC 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11CC_DA2DA3:DT10DT11_FF0.0160.6633.224-3.6022.23432.5140.793-0.6433.2413.9686.432.781
12CC_DA3DG4:DC9DT10_FF0.399-0.1493.166-1.7142.91129.771-0.867-1.1133.115.6433.32229.958
14CC_DA5DT6:DA7DT8_FF-0.434-2.0772.853-9.1811.99621.331-5.744-1.6762.6095.08723.39523.286
13CC_DG4DA5:DT8DC9_FF-0.318-0.7063.78-4.033-12.12938.120.626-0.0873.834-17.9655.97340.13
15CD_DT6DA7:DT6DA7_EF-0.056-2.4394.167-1.74933.37752.081-4.136-0.0362.35734.3211.79861.246
16DD_DA7DT8:DA5DT6_EE0.233-2.4133.1179.9890.78919.672-6.5963.0572.8022.14-27.08222.055
18DD_DC9DT10:DA3DG4_EE-0.492-0.223.1820.3812.45628.471-0.9861.0813.1464.982-0.77228.578
17DD_DT8DC9:DG4DA5_EE0.128-0.8473.6144.524-9.10640.28-0.0940.3673.704-12.974-6.44541.491
19DD_DT10DT11:DA2DA3_EE-0.350.783.1594.7066.64431.4840.2491.4363.1711.994-8.49632.494

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.