A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: ARH063  PDB ID: 1RXA 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_C1:G8_A-0.593-0.398-0.1265.1266.802-2.555
12A_C2:G7_A-0.173-0.259-0.24613.552-5.985-9.032
13A_C3:G6_A0.6320.0950.55-1.182-7.6859.515
14A_C4:G5_A-0.154-0.3810.553-7.877-7.021-4.138
15A_G5:C4_A0.154-0.3810.5537.877-7.021-4.138
16A_G6:C3_A-0.6320.0950.551.182-7.6859.515
17A_G7:C2_A0.173-0.259-0.246-13.552-5.985-9.032
18A_G8:C1_A0.593-0.398-0.126-5.1266.802-2.554

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.