A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Aug-2019 number of released structures: 10334
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NDB ID: PD0503  PDB ID: 1RZT 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
17BB_DA10DC11:DG1DT2_CC0.918-0.5422.9274.9881.56532.266-1.211-0.8443.0022.793-8.90232.675
11BB_DC1DG2:DC3DG4_DD0.2510.7573.3411.7159.42436.458-0.116-0.1543.43314.751-2.68437.654
14BB_DC7DG8:DC4DG5_CC-0.5320.6153.319-2.8718.51331.093-0.4740.4233.39915.4815.22132.334
16BB_DC9DA10:DT2DG3_CC-0.4930.0033.551-3.4188.41138.323-1.0870.2893.50512.5985.11939.344
12BB_DG2DG3:DC2DC3_DD-0.259-0.2273.187-3.3965.45635.007-1.146-0.0573.1288.9775.58735.574
13BB_DG3DC4:DG1DC2_DD0.465-0.7813.1522.6796.70632.94-2.38-0.392.96811.652-4.65533.701
15BB_DG8DC9:DG3DC4_CC-0.157-0.1683.1520.5253.96931.374-1.0140.3823.1057.301-0.96631.622
118FF_DA10DC11:DG1DT2_GG1.261-0.3043.1688.0833.98736.262-1.006-0.8963.3136.288-12.74637.328
115FF_DC7DG8:DC4DG5_GG-0.6090.7543.296-4.5389.89131.572-0.4240.2653.42317.5398.04633.35
117FF_DC9DA10:DT2DG3_GG-0.650.0713.2750.4396.28534.45-0.831.1483.22910.503-0.73335.005
116FF_DG8DC9:DG3DC4_GG0.191-0.1673.246-0.2542.72433.13-0.742-0.3773.2214.7660.44433.24
19HH_DC2DC3:DG2DG3_FF-0.005-0.2273.1193.6092.94536.055-0.7540.4873.0774.734-5.80136.345
110HH_DC3DG4:DC1DG2_FF0.1010.6453.483-2.339.57833.42-0.516-0.5573.51516.2223.94734.803
18HH_DG1DC2:DG3DC4_FF-0.377-0.6113.094-6.9769.8131.831-2.511-0.3972.80817.1412.18733.976
111HJ_DG4DC1:DG4DC1_LF-0.4550.0673.376-0.4820.65942.4270.0240.5783.3810.910.66642.435
122JJ_DA10DC11:DG1DT2_KK1.053-0.713.1693.36-1.02935.344-1.016-1.2423.271-1.689-5.51735.513
112JJ_DC1DG2:DC3DG4_LL0.6211.1793.1140.0163.18637.0381.44-0.9733.2015.004-0.02537.17
119JJ_DC7DG8:DC4DG5_KK-0.3260.8543.371-4.2888.50233.0190.02-0.1683.49114.5867.35534.328
121JJ_DC9DA10:DT2DG3_KK-0.6020.1583.435-0.1498.24736.755-0.8880.9123.39312.8790.23337.638
113JJ_DG2DG3:DC2DC3_LL-0.521-0.1463.266-2.4264.36236.231-0.8340.4953.2546.9733.87936.562
114JJ_DG3DC4:DG1DC2_LL0.495-0.4893.1935.2796.12232.246-1.855-0.0033.09110.812-9.32233.218
120JJ_DG8DC9:DG3DC4_KK0.173-0.2533.166-0.223.07532.199-0.979-0.3493.1285.5290.39632.342
129NN_DA10DC11:DG1DT2_OO1.03-0.4913.0432.4331.15436.619-0.927-1.3243.0871.833-3.86636.714
123NN_DC1DG2:DC3DG4_PP0.6020.8532.941-2.463.35935.7440.948-1.2922.965.4493.99135.978
126NN_DC7DG8:DC4DG5_OO-0.580.6643.32-4.5049.46131.875-0.4950.2223.4216.6737.93833.511
128NN_DC9DA10:DT2DG3_OO-0.3790.2453.527-2.31610.0137.042-0.9930.263.4915.3963.56338.392
124NN_DG2DG3:DC2DC3_PP-0.519-0.0463.459-2.0151.84336.575-0.3420.5333.4762.9313.20536.673
125NN_DG3DC4:DG1DC2_PP0.323-0.8053.2222.5016.88433.642-2.398-0.173.01911.722-4.25934.407
127NN_DG8DC9:DG3DC4_OO0.025-0.1723.173.3892.70230.846-0.820.5793.1295.048-6.33131.142

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.