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As of 18-May-2022 number of released structures: 12082
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NDB ID: PR0111  PDB ID: 1S03 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_A3:U45_A0.73-0.212-0.274-10.119-16.276-5.355
16A_A6:U42_A-0.856-0.3840.19-8.462-9.1040.884
110A_A12:U38_A0.217-0.05-0.401-14.929-17.198-6.214
111A_A14:A13_A-7.2030.191-1.39324.823-11.555-6.116
116A_A19:U32_A-0.015-0.056-0.11-4.794-14.1492.23
119A_A22:U29_A-0.034-0.1060.154.802-9.7248.593
14A_C4:G44_A-0.87-0.1480.162-0.176-12.355-3.997
112A_C15:G37_A0.067-0.185-0.02415.656-19.521-0.815
115A_C18:G33_A0.038-0.1270.166-0.191-16.9963.31
11A_G1:C47_A-1.199-0.163-0.329-6.082-8.191-6.287
12A_G2:C46_A-0.420.3881.0974.205-19.46211.032
15A_G5:C43_A0.736-0.154-0.432-13.644-17.552-4.415
17A_G8:C41_A0.391-0.239-0.031-8.037-20.317-1.936
18A_G9:C40_A0.45-0.104-0.154-4.131-7.126-9.199
19A_G11:C39_A-0.081-0.14-0.043-9.097-11.246-0.851
114A_G17:C34_A-0.342-0.2650.2563.48-15.901-3.726
118A_G21:C30_A0.001-0.1550.097-2.41-13.1920.873
113A_U16:A36_A-0.262-0.236-0.056-4.430.3820.157
117A_U20:A31_A-0.042-0.115-0.097-2.496-10.5214.088
122B_A3:U45_B0.2080.0280.377-4.529-9.1577.449
125B_A6:U42_B-0.153-0.3410.38-2.979-8.148-0.323
129B_A12:U38_B0.327-0.079-0.413-16.432-14.493-6.652
130B_A14:A13_B-7.1950.191-1.41424.435-10.676-5.088
135B_A19:U32_B0.225-0.071-0.07-0.854-13.131.121
138B_A22:U29_B0.4080.0710.1245.82-8.55.097
123B_C4:G44_B0.186-0.0380.361-0.187-5.537-2.076
131B_C15:G37_B0.199-0.159-0.29121.958-20.74-2.797
134B_C18:G33_B0.117-0.110.1650.282-19.5913.562
120B_G1:C47_B-1.127-0.411-0.051-7.462-10.711-0.235
121B_G2:C46_B-0.6460.0290.042-5.373-13.1289.397
124B_G5:C43_B-0.187-0.230.233-7.393-15.4431.33
126B_G8:C41_B0.054-0.1680.019-10.305-17.2155.141
127B_G9:C40_B0.347-0.0480.049-6.178-7.33.278
128B_G11:C39_B-0.105-0.127-0.221-10.491-13.301-0.456
133B_G17:C34_B-0.353-0.3160.3016.264-13.86-4.889
137B_G21:C30_B0.162-0.241-0.088-2.211-17.3310.525
132B_U16:A36_B-0.281-0.345-0.117-1.883-1.919-1.142
136B_U20:A31_B0.085-0.2250.035-0.543-10.7341.437

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.