A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Jan-2022 number of released structures: 11891
Search for released structures

NDB ID: PD0536  PDB ID: 1T03 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
19T_DA715:DT813_P0.081-0.1740.111.788-2.2361.34
110T_DA716:DT812_P0.0330.006-0.368-9.83-14.353-6.012
112T_DA718:DT810_P0.045-0.103-0.178-12.048-7.5641.522
116T_DA722:DT806_P-0.061-0.1870.55211.7177.5844.164
13T_DC709:DG819_P0.027-0.2-1.35321.657-8.064-0.371
15T_DC711:MRG817_P0.24-0.253-0.925.286-10.6323.844
16T_DC712:DG816_P0.099-0.036-0.5555.904-6.9251.845
17T_DC713:DG815_P0.025-0.151.107-6.712-3.6461.42
111T_DC717:DG811_P0.05-0.17-0.598-3.85-16.9787.039
117T_DC723:DG805_P0.0730.0170.5017.31-1.8320.265
11T_DG707:DC821_P-0.351-0.273-0.815-4.0421.6394.058
12T_DG708:DC820_P-0.238-0.127-0.7191.372-0.6125.038
14T_DG710:DC818_P-0.246-0.011-0.308-16.245-10.8552.69
18T_DG714:DC814_P-0.232-0.062-0.057-5.593-1.762-0.545
113T_DG719:DC809_P-0.057-0.0290.535.296-5.63-1.743
114T_DG720:DC808_P-0.113-0.0240.3488.9021.3310.738
115T_DG721:DC807_P-0.0690.0080.3693.724-3.022-0.291
119T_DG725:DC803_P0.046-0.0230.385-19.7738.630.493
118T_DT724:DA804_P-0.011-0.1580.341-3.178-12.3164.486

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.