A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: PD0552  PDB ID: 1TEZ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12I_DC3:DG13_J0.6190.040.0185.902-9.8884.665
15I_DC6:DG10_J0.489-0.030.0475.7464.6312.415
13I_DG4:DC12_J-0.1970.0330.5864.675-19.652-5.084
14I_DG5:DC11_J-0.4730.054-0.278-6.4255.394.368
11I_DT2:DA14_J-0.1490.0640.025-5.542-15.13-5.129
17K_DC3:DG13_L0.576-0.0360.0886.826-7.6753.992
110K_DC6:DG10_L0.56-0.0270.0394.4945.9962.512
18K_DG4:DC12_L-0.1970.0480.6057.606-20.591-4.349
19K_DG5:DC11_L-0.4610.029-0.305-7.4375.0282.919
16K_DT2:DA14_L-0.0860.0540.16-5.361-12.863-4.986

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.