1TEZ: Base Pair Morphology Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082

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NDB ID: PD0552 PDB ID: 1TEZ

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	2	I_DC3:DG13_J	0.619	0.04	0.018	5.902	-9.888	4.665
1	5	I_DC6:DG10_J	0.489	-0.03	0.047	5.746	4.631	2.415
1	3	I_DG4:DC12_J	-0.197	0.033	0.586	4.675	-19.652	-5.084
1	4	I_DG5:DC11_J	-0.473	0.054	-0.278	-6.425	5.39	4.368
1	1	I_DT2:DA14_J	-0.149	0.064	0.025	-5.542	-15.13	-5.129
1	7	K_DC3:DG13_L	0.576	-0.036	0.088	6.826	-7.675	3.992
1	10	K_DC6:DG10_L	0.56	-0.027	0.039	4.494	5.996	2.512
1	8	K_DG4:DC12_L	-0.197	0.048	0.605	7.606	-20.591	-4.349
1	9	K_DG5:DC11_L	-0.461	0.029	-0.305	-7.437	5.028	2.919
1	6	K_DT2:DA14_L	-0.086	0.054	0.16	-5.361	-12.863	-4.986

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.