A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: PD0552  PDB ID: 1TEZ 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12II_DC3DG4:DC12DG13_JJ-1.2720.9243.36-7.8492.30136.5741.1140.8723.5963.61112.31937.447
13II_DG4DG5:DC11DC12_JJ1.550.1543.7096.986-5.48836.321.091-1.3363.868-8.646-11.00537.355
14II_DG5DC6:DG10DC11_JJ-0.487-0.2853.119-2.0935.71331.81-1.470.5223.04810.3053.77532.372
11II_DT2DC3:DG13DA14_JJ1.0120.442.9832.3879.67632.075-0.737-1.3833.04917.006-4.19633.549
16KK_DC3DG4:DC12DG13_LL-1.2450.9263.234-6.5961.73836.5191.2151.053.4382.74410.41537.13
17KK_DG4DG5:DC11DC12_LL1.4770.1323.8067.231-5.50836.5881.065-1.1583.956-8.612-11.30537.663
18KK_DG5DC6:DG10DC11_LL-0.477-0.2813.129-2.5486.42932.07-1.5540.4273.04511.4714.54732.789
15KK_DT2DC3:DG13DA14_LL1.0270.3412.9582.6189.8632.057-0.917-1.3763.00117.316-4.59733.601

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.