1UA0: Base Pair Morphology Step Parameters

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As of 29-Jun-2022 number of released structures: 12153

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NDB ID: PD0585 PDB ID: 1UA0

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	BB_DA24DT25:DA8DT9_CC	0.71	-0.477	3.18	-1.382	1.511	29.871	-1.225	-1.649	3.118	2.927	2.677	29.939
1	1	BB_DG21DG22:DC11DC12_CC	-0.293	0.623	3.35	-2.013	-1.077	42.922	0.959	0.196	3.344	-1.47	2.749	42.98
1	2	BB_DG22DG23:DC10DC11_CC	-0.404	-0.06	3.161	0.476	11.447	26.031	-2.661	0.929	2.871	23.988	-0.997	28.4
1	3	BB_DG23DA24:DT9DC10_CC	-0.62	0.081	3.27	-1.022	1.795	39.347	-0.092	0.798	3.285	2.663	1.517	39.399
1	6	BB_DG26DG27:DC6DC7_CC	-0.201	-0.582	3.458	-7.688	10.299	37.975	-2.083	-0.626	3.181	15.301	11.422	40.015
1	7	BB_DG27DT28:DA5DC6_CC	-0.67	-1.697	3.499	-0.917	7.847	23.679	-6.256	1.279	2.823	18.476	2.158	24.944
1	5	BB_DT25DG26:DC7DA8_CC	0.913	-0.141	3.212	2.477	7.559	30.517	-1.653	-1.224	3.15	14.063	-4.609	31.513
1	8	BB_DT28DG29:DC4DA5_CC	-0.523	-1.33	3.488	-2.895	14.596	29.432	-4.804	0.436	2.597	26.687	5.293	32.905

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.