A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-Dec-2019 number of released structures: 10507
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NDB ID: UD0048  PDB ID: 1V3P 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_C382:DG15_B0.511-0.0910.0516.173.5833.599
14A_DA6:DG11_B-6.137-4.0291.547-25.91-22.46916.13
16A_DC8:DG9_B0.012-0.2880.045-0.1822.943-0.846
11A_DG1:DC16_B-0.4730.035-0.317-10.5423.740.255
13A_DG3:DA14_B6.418-4.6421.47626.533-22.67.54
15A_DG7:C3810_B-0.298-0.2120.08-16.0314.366-0.066

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.