A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: AD0035  PDB ID: 1WV5 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16A_2BT6:DA15_B-0.163-0.315-0.041-0.509-18.1640.313
15A_DA5:2BT16_B0.31-0.2870.136-0.489-15.04-0.444
17A_DA7:DT14_B0.227-0.161-0.0510.076-16.1186.435
12A_DC2:DG19_B0.37-0.2930.2157.067-15.5742.751
18A_DC8:DG13_B-0.155-0.131-0.147.828-12.7332.95
110A_DC10:DG11_B0.171-0.098-0.10915.146-7.0420.284
11A_DG1:DC20_B-0.3130.0610.3884.162-5.8893.975
13A_DG3:DC18_B-0.399-0.1280.002-7.348-15.271-0.481
19A_DG9:DC12_B-0.093-0.176-0.0432.427-7.4993.377
14A_DT4:DA17_B-0.296-0.1980.021-0.517-9.01-4.331

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.