A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: AD0035  PDB ID: 1WV5 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
16AA_2BT6DA7:DT14DA15_BB-0.106-1.1873.2431.2214.34132.288-3.9150.3422.50324.335-2.0735.272
15AA_DA52BT6:DA152BT16_BB-0.004-1.3723.3092.499.01729.908-4.1660.4552.77816.957-4.68331.305
17AA_DA7DC8:DG13DT14_BB0.392-1.1343.1630.4974.34928.128-3.245-0.692.9648.88-1.01528.46
12AA_DC2DG3:DC18DG19_BB-0.533-1.7983.386-0.6815.39128.817-5.6330.8432.18228.4991.25832.599
18AA_DC8DG9:DC12DG13_BB0.096-1.6383.4240.8599.93729.535-4.89-0.022.74318.827-1.62831.138
11AA_DG1DC2:DG19DC20_BB-0.107-1.4163.2580.061.85537.641-2.4290.1733.1872.873-0.09237.686
13AA_DG3DT4:DA17DC18_BB-0.537-1.4153.167-1.1794.87131.414-3.4190.7782.9378.9242.16131.802
19AA_DG9DC10:DG11DC12_BB0.154-1.3853.163-1.0712.70228.19-3.419-0.5493.0125.5282.19228.336
14AA_DT4DA5:2BT16DA17_BB0.641-1.2023.1791.33814.75934.988-3.565-0.8312.51123.299-2.11237.906

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.