1WZ2: Base Pair Morphology Step Parameters

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As of 31-May-2023 number of released structures: 12820

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NDB ID: PR0145 PDB ID: 1WZ2

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	2	CC_C902G903:C982G983_CC	2.244	-0.597	4.363	9.788	8.036	24.896	-3.994	-1.3	4.509	17.285	-21.053	27.886
1	14	CC_C922U908:A914G915_CC	-1.584	-3.36	-1.831	138.518	-86.273	-11.619	1.108	-1.748	-0.617	47.128	75.667	-163.275
1	19	CC_C928G929:U947G910_CC	2.021	-0.276	3.505	-17.252	11.157	56.773	-0.821	-2.861	2.75	11.332	17.523	60.084
1	25	CC_C948C949:G956G957_CC	-0.649	-2.054	3.016	-2.449	1.573	33.393	-3.799	0.758	2.957	2.731	4.251	33.516
1	26	CC_C949C950:G955G956_CC	0.246	-1.962	3.506	1.809	5.833	29.761	-4.937	-0.1	3.084	11.208	-3.475	30.367
1	8	CC_C961G962:C976G977_CC	-0.611	-1.771	3.818	5.911	12.99	32.111	-4.995	1.949	2.767	22.167	-10.087	35.063
1	1	CC_G901C902:G983C984_CC	-0.603	-1.965	2.812	3.483	8.902	39.697	-3.594	1.169	2.279	12.884	-5.041	40.786
1	3	CC_G903G904:C981C982_CC	-0.789	-1.852	2.987	-13.952	15.63	33.589	-4.313	-0.231	2.117	24.332	21.72	39.427
1	4	CC_G904G905:C980C981_CC	0.587	-1.84	3.272	10.215	5.512	30.157	-4.274	0.728	2.938	10.134	-18.781	32.265
1	5	CC_G905G906:C979C980_CC	0.543	-1.986	4.102	-6.392	9.115	22.657	-7.539	-3.342	2.848	21.605	15.152	25.212
1	6	CC_G906G907:C978C979_CC	-1.535	-1.559	3.068	-3.76	-0.943	33.831	-2.517	2.04	3.256	-1.614	6.435	34.046
1	7	CC_G907C961:G977C978_CC	-0.574	-1.234	2.872	6.11	0.906	39.882	-1.878	1.425	2.731	1.319	-8.893	40.338
1	17	CC_G926G927:C911C912_CC	0.524	-1.651	3.838	14.669	12.169	29.734	-4.77	1.594	2.912	21.195	-25.549	35.202
1	18	CC_G927C928:G910C911_CC	0.741	-1.147	2.8	-1.401	11.309	34.422	-3.117	-1.35	2.291	18.492	2.29	36.205
1	20	CC_G929G930:C946U947_CC	-0.059	-2.313	3.39	-4.383	11.364	28.803	-6.261	-0.648	2.317	21.663	8.355	31.222
1	21	CC_G930G931:C945C946_CC	0.157	-2.157	3.318	-2.721	12.738	28.299	-6.162	-0.75	2.147	24.481	5.23	31.097
1	22	CC_G931G932:C944C945_CC	-0.923	-1.526	3.204	-0.488	8.33	35.42	-3.525	1.417	2.798	13.462	0.788	36.359
1	23	CC_G932G933:C943C944_CC	0.118	-1.548	3.676	0.034	4.082	28.415	-4.125	-0.229	3.425	8.262	-0.069	28.7
1	24	CC_G933A934:U942C943_CC	-0.583	-1.327	3.185	0.666	0.979	32.265	-2.555	1.163	3.133	1.762	-1.198	32.286
1	9	CC_G962G963:C975C976_CC	0.509	-1.18	3.354	-3.163	13.704	28.093	-4.609	-1.501	2.457	26.252	6.059	31.354
1	10	CC_G963G964:C974C975_CC	0.526	-1.587	3.134	-3.477	2.515	29.207	-3.612	-1.719	2.909	4.953	6.849	29.514
1	11	CC_G964G965:C973C974_CC	0.805	-2.295	3.287	-2.928	5.596	37.722	-4.17	-1.578	2.862	8.582	4.489	38.229
1	12	CC_G965U966:A970C973_CC	-2.06	-2.332	3.234	0.94	-3.854	78.732	-1.731	1.648	3.306	-3.036	-0.74	78.816
1	15	CC_U908U909:G913A914_CC	0.175	2.668	3.739	3.689	5.636	-16.989	-11.585	2.634	2.628	-18.176	11.898	-18.267
1	16	CC_U909G926:C912G913_CC	-1.969	-4.05	3.243	-18.558	-12.005	119.415	-2.21	0.947	3.651	-6.922	10.701	120.652
1	13	CC_U966U967:G919A970_CC	1.627	-1.864	3.268	23.102	-7.8	41.832	-1.56	0.151	3.894	-9.975	-29.544	48.143
1	50	DD_A914G915:C960U908_DD	1.566	-3.178	3.386	3.638	11.444	-71.409	2.279	1.46	3.719	-9.736	3.095	-72.279
1	28	DD_C902G903:C982G983_DD	0.871	-2.962	3.381	-4.995	11.104	16.92	-11.716	-3.992	0.977	32.777	14.745	20.82
1	47	DD_C911C912:G926G927_DD	-0.069	-2.367	3.159	-2.847	16.173	31.74	-5.752	-0.218	1.782	27.398	4.823	35.639
1	48	DD_C912G913:U909G926_DD	1.798	-5.028	3.308	3.49	5.11	110.512	-3.119	-1.052	3.188	3.108	-2.123	110.628
1	41	DD_C943C944:G932G933_DD	-0.14	-1.675	3.619	-4.333	3.875	31.955	-3.729	-0.57	3.387	6.967	7.79	32.465
1	42	DD_C944C945:G931G932_DD	-0.245	-2.161	3.217	-5.461	8.461	28.941	-5.599	-0.508	2.504	16.318	10.533	30.608
1	43	DD_C945C946:G930G931_DD	-0.244	-1.92	3.372	1.226	-7.177	33.221	-2.033	0.632	3.683	-12.368	-2.112	33.987
1	44	DD_C946U947:G929G930_DD	-0.349	-1.939	3.572	6.145	14.315	28.626	-5.846	1.646	2.254	26.608	-11.422	32.513
1	34	DD_C961G962:C976G977_DD	-0.694	-2.481	3.042	6.629	3.477	37.144	-4.215	1.818	2.649	5.392	-10.278	37.864
1	27	DD_G901C902:G983C984_DD	-0.856	-1.864	3.626	-13.345	6.437	37.843	-3.489	-0.421	3.381	9.493	19.679	40.542
1	29	DD_G903G904:C981C982_DD	0.091	-1.117	3.193	-7.624	-4.015	36.11	-1.223	-1.157	3.21	-6.365	12.088	37.091
1	30	DD_G904G905:C980C981_DD	0.817	-2.501	3.553	7.174	6.943	29.683	-5.994	-0.114	3.016	13.096	-13.53	31.281
1	31	DD_G905G906:C979C980_DD	0.931	-1.598	3.161	8.818	13.546	26.585	-5.335	-0.211	2.291	26.566	-17.294	31.037
1	32	DD_G906G907:C978C979_DD	-0.148	-1.944	2.568	-9.085	5.829	31.001	-4.186	-0.895	2.135	10.514	16.387	32.783
1	33	DD_G907C961:G977C978_DD	-0.419	-1.262	3.283	0.534	9.027	36.08	-3.133	0.725	2.889	14.299	-0.846	37.16
1	46	DD_G910C911:G927C928_DD	0.154	-2.105	3.463	1.616	0.859	33.592	-3.785	0.011	3.413	1.485	-2.793	33.641
1	49	DD_G913A914:U908U909_DD	-0.099	3.119	2.991	-5.331	-11.795	-4.273	5.138	-8.679	3.6	65.432	-29.574	-13.628
1	51	DD_G915C922:A971C960_DD	-0.507	-3.592	2.22	7.371	7.912	-144.38	1.859	-0.242	2.309	-4.154	3.87	-144.543
1	52	DD_G955G956:C949C950_DD	-0.098	-1.949	3.758	6.787	5.967	32.262	-4.461	1.396	3.269	10.483	-11.924	33.471
1	53	DD_G956G957:C948C949_DD	-0.14	-1.702	2.995	-0.645	1.174	30.578	-3.434	0.149	2.931	2.225	1.222	30.607
1	54	DD_G957U958:A923C948_DD	-1.533	-2.236	3.15	5.227	-2.815	84.503	-1.597	1.255	3.128	-2.091	-3.883	84.672
1	35	DD_G962G963:C975C976_DD	0.509	-1.985	3.333	-3.089	8.12	30.874	-4.966	-1.443	2.676	14.887	5.664	32.044
1	36	DD_G963G964:C974C975_DD	0.878	-1.696	3.207	3.519	13.244	27.838	-5.442	-1.042	2.276	25.654	-6.815	30.968
1	37	DD_G964G965:C973C974_DD	-0.065	-1.362	3.504	-1.22	7.452	36.633	-3.139	-0.064	3.177	11.703	1.917	37.377
1	38	DD_G965U966:A970C973_DD	-2.622	-1.977	3.566	-5.429	-5.989	79.464	-1.36	1.88	3.826	-4.674	4.237	79.807
1	40	DD_U942C943:G933A934_DD	0.037	-1.726	3.444	1.441	4.768	30.059	-4.25	0.22	3.137	9.115	-2.754	30.459
1	45	DD_U947G910:C928G929_DD	-2.652	-0.768	3.515	5.427	6.164	61.446	-1.041	2.836	3.211	6.003	-5.285	61.939
1	55	DD_U958U959:A924A923_DD	-4.585	-1.822	3.637	-4.655	27.283	9.272	-9.0	8.189	0.197	70.811	12.082	29.161
1	39	DD_U966U967:G919A970_DD	1.945	-1.337	3.046	18.638	-8.028	50.753	-0.941	-0.917	3.662	-8.967	-20.816	54.409

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.