1XV0: Base Pair Morphology Step Parameters

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NDB ID: 1XV0 PDB ID: 1XV0

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	1	AA_G1G2:C18C19_BB	0.121	-1.64	3.334	1.184	5.535	32.328	-3.835	-0.015	3.022	9.847	-2.107	32.807
1	2	AA_G2U3:G17C18_BB	0.501	-1.251	3.187	0.22	1.922	41.0	-1.986	-0.692	3.13	2.742	-0.315	41.044
1	4	AB_G4G14:A6A16_AB	-0.101	7.267	0.042	167.246	55.633	-165.854	-3.632	-0.056	-0.229	-27.821	83.637	-179.539
1	3	AA_U3G4:A16G17_BB	-0.983	-0.996	3.501	8.111	0.715	56.568	-1.083	1.497	3.331	0.75	-8.509	57.103
1	7	BB_C12G11:C9G8_AA	0.046	1.696	-3.179	0.472	-1.537	-36.157	-2.939	0.01	-3.107	2.475	0.76	-36.191
1	6	BB_C13C12:G8G7_AA	-0.206	1.746	-3.112	-2.43	-4.592	-29.001	-4.331	0.07	-2.815	9.078	-4.803	-29.452
1	5	BB_G14C13:G7A6_AA	0.37	1.144	-3.299	-2.755	-7.666	-53.365	-1.728	0.575	-3.098	8.48	-3.048	-53.938

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.