1Z30: Base Pair Morphology Parameters

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As of 18-May-2022 number of released structures: 12082

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NDB ID: 1Z30 PDB ID: 1Z30

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	3	A_C3:G16_A	0.481	-0.133	-0.08	0.433	-14.218	0.308
1	7	A_C7:G12_A	0.679	-0.107	-0.408	22.48	-16.559	0.614
1	1	A_G1:C18_A	-0.462	-0.138	-0.586	-13.381	-9.569	-0.187
1	2	A_G2:U17_A	-1.972	-0.266	0.019	-1.525	-13.478	5.243
1	4	A_G4:C15_A	-0.054	-0.038	-0.038	-12.677	-20.395	-0.55
1	5	A_U5:A14_A	-0.106	0.021	0.408	-7.263	-7.535	-5.018
1	6	A_U6:A13_A	-0.272	0.094	-0.034	12.019	-9.695	-5.178

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.