A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
Search for released structures

NDB ID: 1Z31  PDB ID: 1Z31 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_A258:U298_A0.18-0.221-0.399-0.231-12.1264.806
110A_A269:U287_A0.597-0.261-0.20913.616-31.1682.361
18A_C265:G292_A0.127-0.149-0.348-2.22212.643-2.867
111A_C270:G286_A0.313-0.1730.381-2.41-7.513-2.578
11A_G257:C299_A-0.306-0.120.057-19.578-11.301-2.196
13A_G259:C297_A0.274-0.046-0.07-13.917-1.362-1.24
14A_G260:C296_A0.583-0.120.14-11.216-15.151-2.693
16A_G263:C294_A-0.621-0.306-0.0031.94-22.8782.252
17A_G264:C293_A0.429-0.123-0.312-2.316-14.4181.303
19A_G268:C288_A-0.415-0.1890.20912.201-11.339-1.315
15A_U261:A295_A-0.171-0.1770.071-2.702-4.6932.741
112A_U271:G285_A0.498-3.2790.652-33.904-0.609-129.738

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.