A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 25-May-2022 number of released structures: 12098
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NDB ID: PR0160  PDB ID: 1ZL3 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13B_A404:U420_B-0.4010.1520.079-9.472-2.6945.708
14B_A405:U419_B0.005-0.232-0.092-4.806-12.262-1.506
12B_C403:G421_B0.093-0.170.0271.414-12.1830.287
15B_C406:G418_B0.238-0.1440.011-3.64-8.4572.464
11B_G402:C422_B-0.166-0.0530.5873.502-12.8032.234
16B_G407:C417_B-0.196-0.423-0.438-11.185-12.4-9.065
17B_G408:C416_B-0.465-0.245-0.03-7.616-5.0510.76
18B_U409:A413_B4.65-2.7550.13421.115.796-88.647

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.