1ZQE: Base Pair Morphology Parameters

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As of 14-Apr-2021 number of released structures: 11277

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NDB ID: PDE031 PDB ID: 1ZQE

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	2	T_DA2:DT6_P	-0.001	-0.57	-0.188	-6.533	-6.397	4.377
1	5	T_DA5:DT3_P	0.548	-0.502	1.158	1.045	-9.453	0.089
1	7	T_DA7:DT1_P	-0.906	-0.409	-0.053	6.452	-1.151	2.733
1	1	T_DC1:DG7_P	1.089	-0.233	-1.741	4.409	-1.157	15.9
1	6	T_DG6:DC2_P	-1.499	-0.71	0.36	11.867	-11.109	-3.773
1	3	T_DT3:DA5_P	-0.436	-0.172	0.433	0.141	-14.052	17.001
1	4	T_DT4:DA4_P	-0.525	-0.688	0.044	-3.512	-8.727	4.084

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.