A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277
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NDB ID: PDE035  PDB ID: 1ZQI 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12T_DA2:DT6_P-0.038-0.2670.035-2.795-8.4793.324
15T_DA5:DT3_P0.437-0.377-0.12-4.054-9.2691.52
17T_DA7:DT1_P-1.12-0.3890.09712.47-3.5110.311
11T_DC1:DG7_P0.5910.042-1.1910.5361.87211.664
16T_DG6:DC2_P-1.385-0.7340.1285.928-11.594-1.89
13T_DT3:DA5_P-0.923-0.0880.399-2.692-15.64911.298
14T_DT4:DA4_P-0.125-0.648-0.0012.41-10.812-0.102

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.