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NDB ID: PR0011  PDB ID: 1B7F 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1B7F|1|P|G|41B7F|1|P|G|40BPh
1B7F|1|P|G|41B7F|1|P|U|3
1B7F|1|P|U|101B7F|1|P|U|100BPh
1B7F|1|P|U|101B7F|1|P|U|11
1B7F|1|P|U|101B7F|1|P|U|9cHS
1B7F|1|P|U|111B7F|1|P|U|10
1B7F|1|P|U|111B7F|1|P|U|11n0BP
1B7F|1|P|U|21B7F|1|P|G|1n9BP
1B7F|1|P|U|21B7F|1|P|U|20BPh
1B7F|1|P|U|51B7F|1|P|U|50BPh
1B7F|1|P|U|51B7F|1|P|U|7
1B7F|1|P|U|61B7F|1|P|U|6n0BP
1B7F|1|P|U|71B7F|1|P|U|7n0BP
1B7F|1|P|U|71B7F|1|P|U|8s35
1B7F|1|P|U|81B7F|1|P|U|7s53
1B7F|1|P|U|81B7F|1|P|U|80BPh
1B7F|1|P|U|91B7F|1|P|U|10cSH
1B7F|1|P|U|91B7F|1|P|U|90BPh
1B7F|1|Q|G|11B7F|1|Q|G|11BPh
1B7F|1|Q|G|41B7F|1|Q|G|40BPh
1B7F|1|Q|U|101B7F|1|Q|U|100BPh
1B7F|1|Q|U|101B7F|1|Q|U|11
1B7F|1|Q|U|101B7F|1|Q|U|9cHS
1B7F|1|Q|U|111B7F|1|Q|U|10
1B7F|1|Q|U|111B7F|1|Q|U|11n0BP
1B7F|1|Q|U|121B7F|1|Q|U|12
1B7F|1|Q|U|51B7F|1|Q|U|50BPh
1B7F|1|Q|U|61B7F|1|Q|U|6n0BP
1B7F|1|Q|U|71B7F|1|Q|U|8s35
1B7F|1|Q|U|81B7F|1|Q|U|7s53
1B7F|1|Q|U|81B7F|1|Q|U|80BPh
1B7F|1|Q|U|91B7F|1|Q|U|10cSH
1B7F|1|Q|U|91B7F|1|Q|U|90BPh


Base-PairsCount (2)Relative Frequency
cHS21.000
Base-PhosphateCount (12)Relative Frequency
1BPh10.083
0BPh110.917
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)