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As of 18-May-2022 number of released structures: 12082
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NDB ID: 1FYO  PDB ID: 1FYO 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1FYO|1|A|A|201FYO|1|A|A|200BPh
1FYO|1|A|A|201FYO|1|A|A|21s35
1FYO|1|A|A|201FYO|1|A|C|8ncWS
1FYO|1|A|A|201FYO|1|A|G|19
1FYO|1|A|A|211FYO|1|A|A|20s53
1FYO|1|A|A|211FYO|1|A|C|8ns55
1FYO|1|A|A|211FYO|1|A|G|22s35
1FYO|1|A|A|211FYO|1|A|G|7ns33
1FYO|1|A|A|91FYO|1|A|A|90BPh
1FYO|1|A|A|91FYO|1|A|C|10s35
1FYO|1|A|A|91FYO|1|A|C|8ns53
1FYO|1|A|A|91FYO|1|A|G|19s55
1FYO|1|A|A|91FYO|1|A|U|18cWW
1FYO|1|A|C|101FYO|1|A|A|9s53
1FYO|1|A|C|101FYO|1|A|C|100BPh
1FYO|1|A|C|101FYO|1|A|C|11s35
1FYO|1|A|C|101FYO|1|A|G|17cWW
1FYO|1|A|C|111FYO|1|A|C|10s53
1FYO|1|A|C|111FYO|1|A|C|110BPh
1FYO|1|A|C|111FYO|1|A|G|16cWW
1FYO|1|A|C|111FYO|1|A|G|17ns55
1FYO|1|A|C|111FYO|1|A|U|12s35
1FYO|1|A|C|141FYO|1|A|C|140BPh
1FYO|1|A|C|141FYO|1|A|G|15s53
1FYO|1|A|C|141FYO|1|A|U|12ns53
1FYO|1|A|C|141FYO|1|A|U|137BPh
1FYO|1|A|C|241FYO|1|A|C|240BPh
1FYO|1|A|C|241FYO|1|A|G|25s35
1FYO|1|A|C|241FYO|1|A|G|4cWW
1FYO|1|A|C|241FYO|1|A|U|23s53
1FYO|1|A|C|261FYO|1|A|C|260BPh
1FYO|1|A|C|261FYO|1|A|C|27s33
1FYO|1|A|C|261FYO|1|A|G|2cWW
1FYO|1|A|C|261FYO|1|A|G|25s53
1FYO|1|A|C|271FYO|1|A|C|26s33
1FYO|1|A|C|271FYO|1|A|C|270BPh
1FYO|1|A|C|271FYO|1|A|G|1cWW
1FYO|1|A|C|271FYO|1|A|G|2s35
1FYO|1|A|C|31FYO|1|A|C|30BPh
1FYO|1|A|C|31FYO|1|A|G|2s53
1FYO|1|A|C|31FYO|1|A|G|25cWW
1FYO|1|A|C|31FYO|1|A|G|4s35
1FYO|1|A|C|61FYO|1|A|C|60BPh
1FYO|1|A|C|61FYO|1|A|G|22cWW
1FYO|1|A|C|61FYO|1|A|G|7s35
1FYO|1|A|C|61FYO|1|A|U|23s55
1FYO|1|A|C|61FYO|1|A|U|5s53
1FYO|1|A|C|81FYO|1|A|A|20ncSW
1FYO|1|A|C|81FYO|1|A|A|21ns55
1FYO|1|A|C|81FYO|1|A|A|9ns35
1FYO|1|A|C|81FYO|1|A|C|80BPh
1FYO|1|A|C|81FYO|1|A|G|19cWW
1FYO|1|A|C|81FYO|1|A|G|7ns53
1FYO|1|A|G|11FYO|1|A|C|27cWW
1FYO|1|A|G|11FYO|1|A|G|2s55
1FYO|1|A|G|151FYO|1|A|C|14s35
1FYO|1|A|G|151FYO|1|A|G|151BPh
1FYO|1|A|G|151FYO|1|A|G|16s55
1FYO|1|A|G|151FYO|1|A|U|13
1FYO|1|A|G|161FYO|1|A|C|11cWW
1FYO|1|A|G|161FYO|1|A|G|15s55
1FYO|1|A|G|161FYO|1|A|G|17s35
1FYO|1|A|G|161FYO|1|A|U|12ns55
1FYO|1|A|G|171FYO|1|A|C|10cWW
1FYO|1|A|G|171FYO|1|A|C|11ns55
1FYO|1|A|G|171FYO|1|A|G|16s53
1FYO|1|A|G|171FYO|1|A|G|170BPh
1FYO|1|A|G|171FYO|1|A|U|18s35
1FYO|1|A|G|191FYO|1|A|A|20
1FYO|1|A|G|191FYO|1|A|A|9s55
1FYO|1|A|G|191FYO|1|A|C|8cWW
1FYO|1|A|G|191FYO|1|A|U|18s53
1FYO|1|A|G|21FYO|1|A|C|26cWW
1FYO|1|A|G|21FYO|1|A|C|27s53
1FYO|1|A|G|21FYO|1|A|C|3s35
1FYO|1|A|G|21FYO|1|A|G|1s55
1FYO|1|A|G|21FYO|1|A|G|20BPh
1FYO|1|A|G|221FYO|1|A|A|21s53
1FYO|1|A|G|221FYO|1|A|C|6cWW
1FYO|1|A|G|221FYO|1|A|G|7s55
1FYO|1|A|G|221FYO|1|A|U|23s35
1FYO|1|A|G|251FYO|1|A|C|24s53
1FYO|1|A|G|251FYO|1|A|C|26s35
1FYO|1|A|G|251FYO|1|A|C|3cWW
1FYO|1|A|G|251FYO|1|A|G|250BPh
1FYO|1|A|G|251FYO|1|A|G|4s55
1FYO|1|A|G|41FYO|1|A|C|24cWW
1FYO|1|A|G|41FYO|1|A|C|3s53
1FYO|1|A|G|41FYO|1|A|G|25s55
1FYO|1|A|G|41FYO|1|A|G|40BPh
1FYO|1|A|G|41FYO|1|A|U|5s35
1FYO|1|A|G|71FYO|1|A|A|21ns33
1FYO|1|A|G|71FYO|1|A|C|6s53
1FYO|1|A|G|71FYO|1|A|C|8ns35
1FYO|1|A|G|71FYO|1|A|G|22s55
1FYO|1|A|G|71FYO|1|A|G|70BPh
1FYO|1|A|U|121FYO|1|A|C|11s53
1FYO|1|A|U|121FYO|1|A|C|14ns35
1FYO|1|A|U|121FYO|1|A|G|16ns55
1FYO|1|A|U|121FYO|1|A|U|120BPh
1FYO|1|A|U|131FYO|1|A|G|15
1FYO|1|A|U|131FYO|1|A|U|130BPh
1FYO|1|A|U|181FYO|1|A|A|9cWW
1FYO|1|A|U|181FYO|1|A|G|17s53
1FYO|1|A|U|181FYO|1|A|G|19s35
1FYO|1|A|U|181FYO|1|A|U|180BPh
1FYO|1|A|U|231FYO|1|A|C|24s35
1FYO|1|A|U|231FYO|1|A|C|6s55
1FYO|1|A|U|231FYO|1|A|G|22s53
1FYO|1|A|U|231FYO|1|A|U|230BPh
1FYO|1|A|U|231FYO|1|A|U|5cWW
1FYO|1|A|U|51FYO|1|A|C|6s35
1FYO|1|A|U|51FYO|1|A|G|4s53
1FYO|1|A|U|51FYO|1|A|U|23cWW
1FYO|1|A|U|51FYO|1|A|U|50BPh


Base-PairsCount (10)Relative Frequency
cWW101.000
Base-PhosphateCount (23)Relative Frequency
1BPh10.043
7BPh10.043
0BPh210.913
Base-StackingCount (13)Relative Frequency
s3310.077
s5360.462
s5560.462

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)