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As of 18-May-2022 number of released structures: 12082
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NDB ID: AH0019  PDB ID: 1JB8 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1JB8|1|A|A|21JB8|1|A|A|3s35
1JB8|1|A|A|31JB8|1|A|A|2s53
1JB8|1|A|A|31JB8|1|A|A|4s35
1JB8|1|A|A|41JB8|1|A|A|3s53
1JB8|1|A|A|41JB8|1|A|A|40BPh
1JB8|1|A|A|41JB8|1|A|G|5s35
1JB8|1|A|A|61JB8|1|A|A|60BPh
1JB8|1|A|A|61JB8|1|A|A|7s35
1JB8|1|A|A|61JB8|1|A|G|5s53
1JB8|1|A|A|71JB8|1|A|A|6s53
1JB8|1|A|A|71JB8|1|A|A|70BPh
1JB8|1|A|A|71JB8|1|A|A|8s35
1JB8|1|A|A|81JB8|1|A|A|7s53
1JB8|1|A|A|81JB8|1|A|A|80BPh
1JB8|1|A|A|81JB8|1|A|A|9s35
1JB8|1|A|A|91JB8|1|A|A|8s53
1JB8|1|A|A|91JB8|1|A|A|90BPh
1JB8|1|A|A|91JB8|1|A|G|10s35
1JB8|1|A|G|101JB8|1|A|A|9s53
1JB8|1|A|G|101JB8|1|A|G|100BPh
1JB8|1|A|G|51JB8|1|A|A|4s53
1JB8|1|A|G|51JB8|1|A|A|6s35
1JB8|1|A|G|51JB8|1|A|G|50BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (7)Relative Frequency
0BPh71.000
Base-StackingCount (1)Relative Frequency
s5311.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)