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As of 8-Jul-2020 number of released structures: 10846
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NDB ID: PR0063  PDB ID: 1KNZ 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1KNZ|1|W|A|41KNZ|1|W|A|40BPh
1KNZ|1|W|A|41KNZ|1|W|G|3s53
1KNZ|1|W|C|61KNZ|1|W|C|60BPh
1KNZ|1|W|G|31KNZ|1|W|A|4s35
1KNZ|1|W|G|31KNZ|1|W|G|3n0BP
1KNZ|1|X|A|41KNZ|1|X|A|40BPh
1KNZ|1|X|A|41KNZ|1|X|G|3s53
1KNZ|1|X|C|61KNZ|1|X|C|5
1KNZ|1|X|C|61KNZ|1|X|C|60BPh
1KNZ|1|X|G|31KNZ|1|X|A|4s35
1KNZ|1|X|G|31KNZ|1|X|G|3n0BP
1KNZ|1|Y|A|41KNZ|1|Y|A|40BPh
1KNZ|1|Y|A|41KNZ|1|Y|G|3s53
1KNZ|1|Y|C|61KNZ|1|Y|C|60BPh
1KNZ|1|Y|G|31KNZ|1|Y|A|4s35
1KNZ|1|Y|G|31KNZ|1|Y|G|3n0BP
1KNZ|1|Z|A|41KNZ|1|Z|A|40BPh
1KNZ|1|Z|A|41KNZ|1|Z|G|3s53
1KNZ|1|Z|C|61KNZ|1|Z|C|5
1KNZ|1|Z|C|61KNZ|1|Z|C|60BPh
1KNZ|1|Z|G|31KNZ|1|Z|A|4s35
1KNZ|1|Z|G|31KNZ|1|Z|G|3n0BP


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (8)Relative Frequency
0BPh81.000
Base-StackingCount (4)Relative Frequency
s5341.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)