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As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 1L1W  PDB ID: 1L1W 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1L1W|1|A|A|151L1W|1|A|G|13ntHS
1L1W|1|A|A|151L1W|1|A|G|14s53
1L1W|1|A|A|151L1W|1|A|G|16s35
1L1W|1|A|A|231L1W|1|A|A|230BPh
1L1W|1|A|A|231L1W|1|A|C|24s35
1L1W|1|A|A|231L1W|1|A|C|6ncWW
1L1W|1|A|A|231L1W|1|A|C|7s55
1L1W|1|A|A|231L1W|1|A|G|22s53
1L1W|1|A|A|261L1W|1|A|A|260BPh
1L1W|1|A|A|261L1W|1|A|C|25s53
1L1W|1|A|A|261L1W|1|A|C|27s35
1L1W|1|A|A|261L1W|1|A|G|4s55
1L1W|1|A|A|261L1W|1|A|U|3cWW
1L1W|1|A|A|291L1W|1|A|C|28s53
1L1W|1|A|A|291L1W|1|A|G|1s55n2BP
1L1W|1|A|A|51L1W|1|A|A|50BPh
1L1W|1|A|A|51L1W|1|A|C|24ncWW
1L1W|1|A|A|51L1W|1|A|C|25ns55
1L1W|1|A|A|51L1W|1|A|C|6s35
1L1W|1|A|A|51L1W|1|A|G|4s53
1L1W|1|A|C|101L1W|1|A|C|100BPh
1L1W|1|A|C|101L1W|1|A|C|11s35
1L1W|1|A|C|101L1W|1|A|C|9s53
1L1W|1|A|C|101L1W|1|A|G|19cWW
1L1W|1|A|C|101L1W|1|A|G|20s55
1L1W|1|A|C|111L1W|1|A|C|10s53
1L1W|1|A|C|111L1W|1|A|C|110BPh
1L1W|1|A|C|111L1W|1|A|G|12s35
1L1W|1|A|C|111L1W|1|A|G|18cWW
1L1W|1|A|C|111L1W|1|A|G|19s55
1L1W|1|A|C|171L1W|1|A|C|170BPh
1L1W|1|A|C|171L1W|1|A|G|12cWW
1L1W|1|A|C|171L1W|1|A|G|13ns55
1L1W|1|A|C|171L1W|1|A|G|16s53
1L1W|1|A|C|171L1W|1|A|G|18s35
1L1W|1|A|C|241L1W|1|A|A|23s53
1L1W|1|A|C|241L1W|1|A|A|5ncWW
1L1W|1|A|C|241L1W|1|A|C|240BPh
1L1W|1|A|C|241L1W|1|A|C|25s35
1L1W|1|A|C|241L1W|1|A|G|4ncWW
1L1W|1|A|C|251L1W|1|A|A|26s35
1L1W|1|A|C|251L1W|1|A|A|5ns55
1L1W|1|A|C|251L1W|1|A|C|24s53
1L1W|1|A|C|251L1W|1|A|C|250BPh
1L1W|1|A|C|251L1W|1|A|G|4cWW
1L1W|1|A|C|271L1W|1|A|A|26s53
1L1W|1|A|C|271L1W|1|A|C|270BPh
1L1W|1|A|C|271L1W|1|A|C|28s35
1L1W|1|A|C|271L1W|1|A|G|2cWW
1L1W|1|A|C|281L1W|1|A|A|29s35
1L1W|1|A|C|281L1W|1|A|C|27s53
1L1W|1|A|C|281L1W|1|A|C|280BPh
1L1W|1|A|C|281L1W|1|A|G|1cWW
1L1W|1|A|C|281L1W|1|A|G|2s55
1L1W|1|A|C|61L1W|1|A|A|23ncWW
1L1W|1|A|C|61L1W|1|A|A|5s53
1L1W|1|A|C|61L1W|1|A|C|60BPh
1L1W|1|A|C|61L1W|1|A|C|7s35
1L1W|1|A|C|61L1W|1|A|G|22ncWW
1L1W|1|A|C|71L1W|1|A|A|23s55
1L1W|1|A|C|71L1W|1|A|C|6s53
1L1W|1|A|C|71L1W|1|A|C|70BPh
1L1W|1|A|C|71L1W|1|A|G|22cWW
1L1W|1|A|C|71L1W|1|A|U|8s35
1L1W|1|A|C|91L1W|1|A|C|10s35
1L1W|1|A|C|91L1W|1|A|C|90BPh
1L1W|1|A|C|91L1W|1|A|G|20cWW
1L1W|1|A|C|91L1W|1|A|G|21s55
1L1W|1|A|C|91L1W|1|A|U|8s53
1L1W|1|A|G|11L1W|1|A|A|29s55
1L1W|1|A|G|11L1W|1|A|C|28cWW
1L1W|1|A|G|11L1W|1|A|G|2s35
1L1W|1|A|G|121L1W|1|A|C|11s53
1L1W|1|A|G|121L1W|1|A|C|17cWW
1L1W|1|A|G|121L1W|1|A|G|12n0BP
1L1W|1|A|G|121L1W|1|A|G|13s35
1L1W|1|A|G|121L1W|1|A|G|18s55
1L1W|1|A|G|131L1W|1|A|A|15ntSH
1L1W|1|A|G|131L1W|1|A|C|17ns55
1L1W|1|A|G|131L1W|1|A|G|12s53
1L1W|1|A|G|131L1W|1|A|G|16ntSH
1L1W|1|A|G|141L1W|1|A|A|15s35
1L1W|1|A|G|141L1W|1|A|G|13
1L1W|1|A|G|141L1W|1|A|G|140BPh
1L1W|1|A|G|161L1W|1|A|A|15s53
1L1W|1|A|G|161L1W|1|A|C|17s35
1L1W|1|A|G|161L1W|1|A|G|13ntHS
1L1W|1|A|G|161L1W|1|A|G|160BPh
1L1W|1|A|G|181L1W|1|A|C|11cWW
1L1W|1|A|G|181L1W|1|A|C|17s53
1L1W|1|A|G|181L1W|1|A|G|12s55
1L1W|1|A|G|181L1W|1|A|G|19s35
1L1W|1|A|G|191L1W|1|A|C|10cWW
1L1W|1|A|G|191L1W|1|A|C|11s55
1L1W|1|A|G|191L1W|1|A|G|18s53
1L1W|1|A|G|191L1W|1|A|G|190BPh
1L1W|1|A|G|191L1W|1|A|G|20s35
1L1W|1|A|G|21L1W|1|A|C|27cWW
1L1W|1|A|G|21L1W|1|A|C|28s55
1L1W|1|A|G|21L1W|1|A|G|1s53
1L1W|1|A|G|21L1W|1|A|U|3s35
1L1W|1|A|G|201L1W|1|A|C|10s55
1L1W|1|A|G|201L1W|1|A|C|9cWW
1L1W|1|A|G|201L1W|1|A|G|19s53
1L1W|1|A|G|201L1W|1|A|G|200BPh
1L1W|1|A|G|201L1W|1|A|G|21s35
1L1W|1|A|G|211L1W|1|A|C|9s55
1L1W|1|A|G|211L1W|1|A|G|20s53
1L1W|1|A|G|211L1W|1|A|G|210BPh
1L1W|1|A|G|211L1W|1|A|G|22s35
1L1W|1|A|G|211L1W|1|A|U|8cWW
1L1W|1|A|G|221L1W|1|A|A|23s35
1L1W|1|A|G|221L1W|1|A|C|6ncWW
1L1W|1|A|G|221L1W|1|A|C|7cWW
1L1W|1|A|G|221L1W|1|A|G|21s53
1L1W|1|A|G|221L1W|1|A|G|220BPh
1L1W|1|A|G|221L1W|1|A|U|8s55
1L1W|1|A|G|41L1W|1|A|A|26s55
1L1W|1|A|G|41L1W|1|A|A|5s35
1L1W|1|A|G|41L1W|1|A|C|24ncWW
1L1W|1|A|G|41L1W|1|A|C|25cWW
1L1W|1|A|G|41L1W|1|A|G|40BPh
1L1W|1|A|G|41L1W|1|A|U|3s53
1L1W|1|A|U|31L1W|1|A|A|26cWW
1L1W|1|A|U|31L1W|1|A|G|2s53
1L1W|1|A|U|31L1W|1|A|G|4s35
1L1W|1|A|U|31L1W|1|A|U|30BPh
1L1W|1|A|U|81L1W|1|A|C|7s53
1L1W|1|A|U|81L1W|1|A|C|9s35
1L1W|1|A|U|81L1W|1|A|G|21cWW
1L1W|1|A|U|81L1W|1|A|G|22s55
1L1W|1|A|U|81L1W|1|A|U|80BPh


Base-PairsCount (10)Relative Frequency
cWW101.000
Base-PhosphateCount (22)Relative Frequency
0BPh221.000
Base-StackingCount (18)Relative Frequency
s5390.500
s5590.500

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)