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As of 23-Nov-2022 number of released structures: 12471
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NDB ID: PD0345  PDB ID: 1MSW 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1MSW|1|R|A|11MSW|1|R|A|10BPh
1MSW|1|R|A|11MSW|1|R|G|2s53
1MSW|1|R|A|71MSW|1|R|A|70BPh
1MSW|1|R|A|71MSW|1|R|C|6s35
1MSW|1|R|A|71MSW|1|R|C|8s53
1MSW|1|R|C|31MSW|1|R|C|30BPh
1MSW|1|R|C|31MSW|1|R|G|2s35
1MSW|1|R|C|31MSW|1|R|G|4s53
1MSW|1|R|C|61MSW|1|R|A|7s53
1MSW|1|R|C|61MSW|1|R|C|60BPh
1MSW|1|R|C|61MSW|1|R|G|5s35
1MSW|1|R|C|81MSW|1|R|A|7s35
1MSW|1|R|G|21MSW|1|R|A|1s35
1MSW|1|R|G|21MSW|1|R|C|3s53
1MSW|1|R|G|21MSW|1|R|G|20BPh
1MSW|1|R|G|41MSW|1|R|C|3s35
1MSW|1|R|G|41MSW|1|R|G|40BPh
1MSW|1|R|G|41MSW|1|R|G|5s53
1MSW|1|R|G|51MSW|1|R|C|6s53
1MSW|1|R|G|51MSW|1|R|G|4s35
1MSW|1|R|G|51MSW|1|R|G|50BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (7)Relative Frequency
0BPh71.000
Base-StackingCount (4)Relative Frequency
s5341.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)