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As of 14-Aug-2019 number of released structures: 10334
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NDB ID: 1MT4  PDB ID: 1MT4 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1MT4|1|A|A|131MT4|1|A|A|14s35
1MT4|1|A|A|131MT4|1|A|G|12s53
1MT4|1|A|A|131MT4|1|A|U|11
1MT4|1|A|A|141MT4|1|A|A|13s53
1MT4|1|A|A|141MT4|1|A|A|15s35
1MT4|1|A|A|141MT4|1|A|U|11ntHS
1MT4|1|A|A|151MT4|1|A|A|14s53
1MT4|1|A|A|151MT4|1|A|A|16s35
1MT4|1|A|A|151MT4|1|A|U|10s33
1MT4|1|A|A|151MT4|1|A|U|11s55
1MT4|1|A|A|161MT4|1|A|A|15s53
1MT4|1|A|A|161MT4|1|A|G|17s35
1MT4|1|A|A|161MT4|1|A|G|9tHS
1MT4|1|A|A|161MT4|1|A|U|10s55
1MT4|1|A|A|201MT4|1|A|A|6s55
1MT4|1|A|A|201MT4|1|A|C|21s35
1MT4|1|A|A|201MT4|1|A|U|19s53
1MT4|1|A|A|201MT4|1|A|U|5cWW
1MT4|1|A|A|61MT4|1|A|A|20s55
1MT4|1|A|A|61MT4|1|A|A|60BPh
1MT4|1|A|A|61MT4|1|A|A|7s35
1MT4|1|A|A|61MT4|1|A|U|19cWW
1MT4|1|A|A|61MT4|1|A|U|5s53
1MT4|1|A|A|71MT4|1|A|A|6s53
1MT4|1|A|A|71MT4|1|A|A|70BPh
1MT4|1|A|A|71MT4|1|A|C|8s35
1MT4|1|A|A|71MT4|1|A|U|18cWW
1MT4|1|A|C|211MT4|1|A|A|20s53
1MT4|1|A|C|211MT4|1|A|C|210BPh
1MT4|1|A|C|211MT4|1|A|G|22s35
1MT4|1|A|C|211MT4|1|A|G|4cWW
1MT4|1|A|C|231MT4|1|A|C|230BPh
1MT4|1|A|C|231MT4|1|A|C|24s35
1MT4|1|A|C|231MT4|1|A|G|2cWW
1MT4|1|A|C|231MT4|1|A|G|22s53
1MT4|1|A|C|241MT4|1|A|C|23s53
1MT4|1|A|C|241MT4|1|A|C|240BPh
1MT4|1|A|C|241MT4|1|A|G|1cWW
1MT4|1|A|C|241MT4|1|A|G|2ns55
1MT4|1|A|C|31MT4|1|A|C|30BPh
1MT4|1|A|C|31MT4|1|A|G|2s53
1MT4|1|A|C|31MT4|1|A|G|22cWW
1MT4|1|A|C|31MT4|1|A|G|4s35
1MT4|1|A|C|81MT4|1|A|A|7s53
1MT4|1|A|C|81MT4|1|A|C|80BPh
1MT4|1|A|C|81MT4|1|A|G|17cWW
1MT4|1|A|C|81MT4|1|A|G|9s35
1MT4|1|A|G|11MT4|1|A|C|24cWW
1MT4|1|A|G|11MT4|1|A|G|2s35
1MT4|1|A|G|121MT4|1|A|A|13s35
1MT4|1|A|G|121MT4|1|A|G|120BPh
1MT4|1|A|G|171MT4|1|A|A|16s53
1MT4|1|A|G|171MT4|1|A|C|8cWW
1MT4|1|A|G|171MT4|1|A|G|170BPh
1MT4|1|A|G|171MT4|1|A|G|9ns55
1MT4|1|A|G|171MT4|1|A|U|18s35
1MT4|1|A|G|21MT4|1|A|C|23cWW
1MT4|1|A|G|21MT4|1|A|C|24ns55
1MT4|1|A|G|21MT4|1|A|C|3s35
1MT4|1|A|G|21MT4|1|A|G|1s53
1MT4|1|A|G|21MT4|1|A|G|20BPh
1MT4|1|A|G|221MT4|1|A|C|21s53
1MT4|1|A|G|221MT4|1|A|C|23s35
1MT4|1|A|G|221MT4|1|A|C|3cWW
1MT4|1|A|G|221MT4|1|A|G|220BPh
1MT4|1|A|G|221MT4|1|A|G|4s55
1MT4|1|A|G|41MT4|1|A|C|21cWW
1MT4|1|A|G|41MT4|1|A|C|3s53
1MT4|1|A|G|41MT4|1|A|G|22s55
1MT4|1|A|G|41MT4|1|A|G|40BPh
1MT4|1|A|G|41MT4|1|A|U|5s35
1MT4|1|A|G|91MT4|1|A|A|16tSH
1MT4|1|A|G|91MT4|1|A|C|8s53
1MT4|1|A|G|91MT4|1|A|G|17ns55
1MT4|1|A|G|91MT4|1|A|G|90BPh
1MT4|1|A|G|91MT4|1|A|U|10s35
1MT4|1|A|U|101MT4|1|A|A|15s33
1MT4|1|A|U|101MT4|1|A|A|16s55
1MT4|1|A|U|101MT4|1|A|G|9s53
1MT4|1|A|U|101MT4|1|A|U|10n0BP
1MT4|1|A|U|111MT4|1|A|A|13
1MT4|1|A|U|111MT4|1|A|A|14ntSH
1MT4|1|A|U|111MT4|1|A|A|15s55
1MT4|1|A|U|181MT4|1|A|A|7cWW
1MT4|1|A|U|181MT4|1|A|G|17s53
1MT4|1|A|U|181MT4|1|A|U|180BPh
1MT4|1|A|U|181MT4|1|A|U|19s35
1MT4|1|A|U|191MT4|1|A|A|20s35
1MT4|1|A|U|191MT4|1|A|A|6cWW
1MT4|1|A|U|191MT4|1|A|U|18s53
1MT4|1|A|U|191MT4|1|A|U|190BPh
1MT4|1|A|U|51MT4|1|A|A|20cWW
1MT4|1|A|U|51MT4|1|A|A|6s35
1MT4|1|A|U|51MT4|1|A|G|4s53
1MT4|1|A|U|51MT4|1|A|U|50BPh


Base-PairsCount (9)Relative Frequency
cWW80.889
tHS10.111
Base-PhosphateCount (16)Relative Frequency
0BPh161.000
Base-StackingCount (10)Relative Frequency
s3310.100
s5350.500
s5540.400

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)