A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 11-May-2022 number of released structures: 12077
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NDB ID: 1OKA  PDB ID: 1OKA 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1OKA|1|B|A|41OKA|1|B|A|40BPh
1OKA|1|B|A|41OKA|1|B|C|3s53
1OKA|1|B|C|11OKA|1|B|C|10BPh
1OKA|1|B|C|11OKA|1|B|C|2s35
1OKA|1|B|C|21OKA|1|B|C|1s53
1OKA|1|B|C|21OKA|1|B|C|20BPh
1OKA|1|B|C|21OKA|1|B|C|3s35
1OKA|1|B|C|31OKA|1|B|A|4s35
1OKA|1|B|C|31OKA|1|B|C|2s53
1OKA|1|B|C|31OKA|1|B|C|30BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (4)Relative Frequency
0BPh41.000
Base-StackingCount (1)Relative Frequency
s5311.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)