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As of 11-May-2022 number of released structures: 12077
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NDB ID: 1R7W  PDB ID: 1R7W 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1R7W|1|A|A|151R7W|1|A|A|150BPh
1R7W|1|A|A|151R7W|1|A|C|14s53
1R7W|1|A|A|151R7W|1|A|C|16s35
1R7W|1|A|A|151R7W|1|A|G|27s55
1R7W|1|A|A|151R7W|1|A|U|26cWW
1R7W|1|A|A|221R7W|1|A|A|220BPh
1R7W|1|A|A|221R7W|1|A|G|19ntHS
1R7W|1|A|A|221R7W|1|A|G|21s53
1R7W|1|A|A|31R7W|1|A|A|3n0BP
1R7W|1|A|A|31R7W|1|A|C|33s55
1R7W|1|A|A|31R7W|1|A|G|2s53
1R7W|1|A|A|31R7W|1|A|G|4s35
1R7W|1|A|A|31R7W|1|A|U|32cWW
1R7W|1|A|A|61R7W|1|A|A|60BPh
1R7W|1|A|A|61R7W|1|A|C|7s35
1R7W|1|A|A|61R7W|1|A|G|5s53
1R7W|1|A|A|61R7W|1|A|U|29cWW
1R7W|1|A|A|81R7W|1|A|A|80BPh
1R7W|1|A|A|81R7W|1|A|C|7s53
1R7W|1|A|A|81R7W|1|A|G|28s55
1R7W|1|A|A|81R7W|1|A|U|9s33
1R7W|1|A|C|101R7W|1|A|C|10n0BP
1R7W|1|A|C|101R7W|1|A|C|11
1R7W|1|A|C|101R7W|1|A|U|9s35n9BP
1R7W|1|A|C|111R7W|1|A|C|10
1R7W|1|A|C|111R7W|1|A|C|12s53
1R7W|1|A|C|121R7W|1|A|C|11s35
1R7W|1|A|C|121R7W|1|A|C|120BPh
1R7W|1|A|C|121R7W|1|A|U|13ns55
1R7W|1|A|C|141R7W|1|A|A|15s35
1R7W|1|A|C|141R7W|1|A|C|14n0BP
1R7W|1|A|C|141R7W|1|A|G|27cWW
1R7W|1|A|C|141R7W|1|A|U|13s53
1R7W|1|A|C|161R7W|1|A|A|15s53
1R7W|1|A|C|161R7W|1|A|C|160BPh
1R7W|1|A|C|161R7W|1|A|G|17s35
1R7W|1|A|C|161R7W|1|A|G|25cWW
1R7W|1|A|C|231R7W|1|A|C|230BPh
1R7W|1|A|C|231R7W|1|A|C|24s35
1R7W|1|A|C|231R7W|1|A|G|18cWW
1R7W|1|A|C|231R7W|1|A|G|19s55
1R7W|1|A|C|241R7W|1|A|C|23s53
1R7W|1|A|C|241R7W|1|A|C|240BPh
1R7W|1|A|C|241R7W|1|A|G|17cWW
1R7W|1|A|C|241R7W|1|A|G|18s55
1R7W|1|A|C|241R7W|1|A|G|25s35
1R7W|1|A|C|301R7W|1|A|C|300BPh
1R7W|1|A|C|301R7W|1|A|C|31s35
1R7W|1|A|C|301R7W|1|A|G|5cWW
1R7W|1|A|C|301R7W|1|A|U|29s53
1R7W|1|A|C|311R7W|1|A|C|30s53
1R7W|1|A|C|311R7W|1|A|C|310BPh
1R7W|1|A|C|311R7W|1|A|G|4cWW
1R7W|1|A|C|311R7W|1|A|G|5s55
1R7W|1|A|C|311R7W|1|A|U|32s35
1R7W|1|A|C|331R7W|1|A|A|3s55
1R7W|1|A|C|331R7W|1|A|C|330BPh
1R7W|1|A|C|331R7W|1|A|C|34s35
1R7W|1|A|C|331R7W|1|A|G|2cWW
1R7W|1|A|C|331R7W|1|A|U|32s53
1R7W|1|A|C|341R7W|1|A|C|33s53
1R7W|1|A|C|341R7W|1|A|C|340BPh
1R7W|1|A|C|341R7W|1|A|G|1cWW
1R7W|1|A|C|341R7W|1|A|G|2s55
1R7W|1|A|C|71R7W|1|A|A|6s53
1R7W|1|A|C|71R7W|1|A|A|8s35
1R7W|1|A|C|71R7W|1|A|C|70BPh
1R7W|1|A|C|71R7W|1|A|G|28cWW
1R7W|1|A|G|11R7W|1|A|C|34cWW
1R7W|1|A|G|11R7W|1|A|G|2s35
1R7W|1|A|G|171R7W|1|A|C|16s53
1R7W|1|A|G|171R7W|1|A|C|24cWW
1R7W|1|A|G|171R7W|1|A|G|170BPh
1R7W|1|A|G|171R7W|1|A|G|18s35
1R7W|1|A|G|171R7W|1|A|G|25s55
1R7W|1|A|G|181R7W|1|A|C|23cWW
1R7W|1|A|G|181R7W|1|A|C|24s55
1R7W|1|A|G|181R7W|1|A|G|17s53
1R7W|1|A|G|181R7W|1|A|G|180BPh
1R7W|1|A|G|181R7W|1|A|G|19s35
1R7W|1|A|G|191R7W|1|A|A|22ntSH3BPh
1R7W|1|A|G|191R7W|1|A|C|23s55
1R7W|1|A|G|191R7W|1|A|G|18s53
1R7W|1|A|G|191R7W|1|A|G|190BPh
1R7W|1|A|G|191R7W|1|A|G|21ns33
1R7W|1|A|G|21R7W|1|A|A|3s35
1R7W|1|A|G|21R7W|1|A|C|33cWW
1R7W|1|A|G|21R7W|1|A|C|34s55
1R7W|1|A|G|21R7W|1|A|G|1s53
1R7W|1|A|G|21R7W|1|A|G|20BPh
1R7W|1|A|G|211R7W|1|A|A|22s35
1R7W|1|A|G|211R7W|1|A|G|19ns33
1R7W|1|A|G|211R7W|1|A|U|20s53
1R7W|1|A|G|251R7W|1|A|C|16cWW
1R7W|1|A|G|251R7W|1|A|C|24s53
1R7W|1|A|G|251R7W|1|A|G|17s55
1R7W|1|A|G|251R7W|1|A|G|250BPh
1R7W|1|A|G|251R7W|1|A|U|26s35
1R7W|1|A|G|271R7W|1|A|A|15s55
1R7W|1|A|G|271R7W|1|A|C|14cWW
1R7W|1|A|G|271R7W|1|A|G|270BPh
1R7W|1|A|G|271R7W|1|A|U|26s53
1R7W|1|A|G|281R7W|1|A|A|8s55
1R7W|1|A|G|281R7W|1|A|C|7cWW
1R7W|1|A|G|281R7W|1|A|G|28n0BP
1R7W|1|A|G|281R7W|1|A|U|29s35
1R7W|1|A|G|41R7W|1|A|A|3s53
1R7W|1|A|G|41R7W|1|A|C|31cWW
1R7W|1|A|G|41R7W|1|A|G|4n0BP
1R7W|1|A|G|41R7W|1|A|G|5s35
1R7W|1|A|G|41R7W|1|A|U|32s55
1R7W|1|A|G|51R7W|1|A|A|6s35
1R7W|1|A|G|51R7W|1|A|C|30cWW
1R7W|1|A|G|51R7W|1|A|C|31s55
1R7W|1|A|G|51R7W|1|A|G|4s53
1R7W|1|A|G|51R7W|1|A|G|50BPh
1R7W|1|A|U|131R7W|1|A|C|12ns55
1R7W|1|A|U|131R7W|1|A|C|14s35
1R7W|1|A|U|131R7W|1|A|U|13n0BP
1R7W|1|A|U|201R7W|1|A|G|21s35
1R7W|1|A|U|261R7W|1|A|A|15cWW
1R7W|1|A|U|261R7W|1|A|G|25s53
1R7W|1|A|U|261R7W|1|A|G|27s35
1R7W|1|A|U|261R7W|1|A|U|260BPh
1R7W|1|A|U|291R7W|1|A|A|6cWW
1R7W|1|A|U|291R7W|1|A|C|30s35
1R7W|1|A|U|291R7W|1|A|G|28s53
1R7W|1|A|U|291R7W|1|A|U|290BPh
1R7W|1|A|U|321R7W|1|A|A|3cWW
1R7W|1|A|U|321R7W|1|A|C|31s53
1R7W|1|A|U|321R7W|1|A|C|33s35
1R7W|1|A|U|321R7W|1|A|G|4s55
1R7W|1|A|U|321R7W|1|A|U|320BPh
1R7W|1|A|U|91R7W|1|A|A|8s33
1R7W|1|A|U|91R7W|1|A|C|10s53
1R7W|1|A|U|91R7W|1|A|U|90BPh


Base-PairsCount (12)Relative Frequency
cWW121.000
Base-PhosphateCount (25)Relative Frequency
3BPh10.040
0BPh240.960
Base-StackingCount (21)Relative Frequency
s3310.048
s53110.524
s5590.429

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)