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NDB ID: 1XWU  PDB ID: 1XWU 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
1XWU|1|A|A|111XWU|1|A|A|5cWW
1XWU|1|A|A|111XWU|1|A|G|10s53
1XWU|1|A|A|111XWU|1|A|U|12s35
1XWU|1|A|A|161XWU|1|A|C|1ns55
1XWU|1|A|A|161XWU|1|A|G|15s53
1XWU|1|A|A|31XWU|1|A|A|30BPh
1XWU|1|A|A|31XWU|1|A|A|4s35
1XWU|1|A|A|31XWU|1|A|C|14ns55
1XWU|1|A|A|31XWU|1|A|G|2s53
1XWU|1|A|A|31XWU|1|A|U|13cWW
1XWU|1|A|A|41XWU|1|A|A|3s53
1XWU|1|A|A|41XWU|1|A|A|40BPh
1XWU|1|A|A|41XWU|1|A|A|5s35
1XWU|1|A|A|41XWU|1|A|U|12cWW
1XWU|1|A|A|41XWU|1|A|U|13ns55
1XWU|1|A|A|51XWU|1|A|A|11cWW
1XWU|1|A|A|51XWU|1|A|A|4s53
1XWU|1|A|A|51XWU|1|A|A|5n0BP
1XWU|1|A|A|51XWU|1|A|C|6s35
1XWU|1|A|A|51XWU|1|A|U|12ns55
1XWU|1|A|A|71XWU|1|A|A|70BPh
1XWU|1|A|A|71XWU|1|A|A|9ncSW
1XWU|1|A|A|71XWU|1|A|C|6s537BPh
1XWU|1|A|A|71XWU|1|A|U|8cSH
1XWU|1|A|A|91XWU|1|A|A|7ncWS
1XWU|1|A|A|91XWU|1|A|C|6ns33
1XWU|1|A|A|91XWU|1|A|G|10s35
1XWU|1|A|A|91XWU|1|A|U|8s55
1XWU|1|A|C|11XWU|1|A|A|16ns55
1XWU|1|A|C|11XWU|1|A|G|15cWW
1XWU|1|A|C|11XWU|1|A|G|2s35
1XWU|1|A|C|141XWU|1|A|A|3ns55
1XWU|1|A|C|141XWU|1|A|C|140BPh
1XWU|1|A|C|141XWU|1|A|G|15s35
1XWU|1|A|C|141XWU|1|A|G|2cWW
1XWU|1|A|C|141XWU|1|A|U|13s53
1XWU|1|A|C|61XWU|1|A|A|5s53
1XWU|1|A|C|61XWU|1|A|A|7s35
1XWU|1|A|C|61XWU|1|A|A|9ns33
1XWU|1|A|C|61XWU|1|A|C|60BPh
1XWU|1|A|C|61XWU|1|A|G|10cWW
1XWU|1|A|G|101XWU|1|A|A|11s35
1XWU|1|A|G|101XWU|1|A|A|9s53
1XWU|1|A|G|101XWU|1|A|C|6cWW
1XWU|1|A|G|151XWU|1|A|A|16s35
1XWU|1|A|G|151XWU|1|A|C|1cWW
1XWU|1|A|G|151XWU|1|A|C|14s53
1XWU|1|A|G|151XWU|1|A|G|15n0BP
1XWU|1|A|G|151XWU|1|A|G|2s55
1XWU|1|A|G|21XWU|1|A|A|3s35
1XWU|1|A|G|21XWU|1|A|C|1s53
1XWU|1|A|G|21XWU|1|A|C|14cWW
1XWU|1|A|G|21XWU|1|A|G|15s55
1XWU|1|A|U|121XWU|1|A|A|11s53
1XWU|1|A|U|121XWU|1|A|A|4cWW
1XWU|1|A|U|121XWU|1|A|A|5ns55
1XWU|1|A|U|121XWU|1|A|U|13s35
1XWU|1|A|U|131XWU|1|A|A|3cWW
1XWU|1|A|U|131XWU|1|A|A|4ns55
1XWU|1|A|U|131XWU|1|A|C|14s35
1XWU|1|A|U|131XWU|1|A|U|12s53
1XWU|1|A|U|131XWU|1|A|U|130BPh
1XWU|1|A|U|81XWU|1|A|A|7cHS
1XWU|1|A|U|81XWU|1|A|A|9s55
1XWU|1|A|U|81XWU|1|A|U|80BPh


Base-PairsCount (7)Relative Frequency
cWW60.857
cHS10.143
Base-PhosphateCount (8)Relative Frequency
7BPh10.125
0BPh70.875
Base-StackingCount (7)Relative Frequency
s5350.714
s5520.286

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)