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NDB ID: 219D  PDB ID: 219D 

RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
219D|1|B|A|13219D|1|B|A|13n0BP
219D|1|B|A|13219D|1|B|C|12s53
219D|1|B|A|13219D|1|B|U|14s35
219D|1|B|A|16219D|1|B|A|160BPh
219D|1|B|A|16219D|1|B|U|15s53
219D|1|B|A|16219D|1|B|U|17s35
219D|1|B|A|18219D|1|B|A|180BPh
219D|1|B|A|18219D|1|B|G|19s35
219D|1|B|A|18219D|1|B|U|17s53
219D|1|B|C|11219D|1|B|C|12s35
219D|1|B|C|12219D|1|B|A|13s35
219D|1|B|C|12219D|1|B|C|11s53
219D|1|B|C|12219D|1|B|C|120BPh
219D|1|B|C|20219D|1|B|C|200BPh
219D|1|B|C|20219D|1|B|G|19s53
219D|1|B|G|19219D|1|B|A|18s53
219D|1|B|G|19219D|1|B|C|20s35
219D|1|B|U|14219D|1|B|A|13s53
219D|1|B|U|14219D|1|B|U|140BPh
219D|1|B|U|14219D|1|B|U|15s35
219D|1|B|U|15219D|1|B|A|16s35
219D|1|B|U|15219D|1|B|U|14s53
219D|1|B|U|15219D|1|B|U|15n0BP
219D|1|B|U|17219D|1|B|A|16s53
219D|1|B|U|17219D|1|B|A|18s35
219D|1|B|U|17219D|1|B|U|17n0BP


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (5)Relative Frequency
0BPh51.000
Base-StackingCount (4)Relative Frequency
s5341.000

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)

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